- Transcript 'KH2012:KH.C10.78.v3....' >
- Transcript 'KH2012:KH.S988.1.v2....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v2.A.nonSL10-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,496 / 15,548]
Amino acid sequence
Length: 226
>KH.S988.1.v2.A.nonSL10-1
SFVERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIALSPN
SNDVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGEWVQ
ELIHHCFVGLASEQHFTRGWLLRLQSLRVLGLHQRNQSKTWSYSLGEEDDVWMFDAGVCD
ALYWMGSRNRIFKLWRLFSDGVPRQCALCRQRWWRININQDGVSSI
Nucleotide sequence
Length: 1,980
>KH2012:KH.S988.1.v2.A.nonSL10-1
AGTTTCGTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGTAGACTGTCCAGAGTCC
ACGAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTTTTAACTTTGGGGTT
CACCCCATTAGTTGTCATTCATGGAATCATGACCGCACGCAAATTGCTTTGAGTCCAAAC
AGCAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATCATATTCATACATTA
AGCGAACATACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGACGAACCGTATTGTT
ACGTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAACGGGGAATGGGTGCAA
GAATTGATCCACCATTGTTTCGTTGGATTGGCATCCGAACAACATTTTACTCGCGGCTGG
TTGTTGCGATTACAAAGCTTACGTGTTCTCGGCTTACATCAAAGAAATCAATCCAAAACC
TGGTCCTACAGTTTGGGGGAAGAAGATGACGTTTGGATGTTTGATGCAGGAGTTTGTGAT
GCCTTGTACTGGATGGGTTCACGGAATCGCATTTTCAAACTCTGGCGATTGTTTAGCGAT
GGTGTCCCACGGCAGTGTGCTCTCTGTCGCCAAAGGTGGTGGAGAATTAACATCAATCAG
GACGGAGTTTCTTCCATTTAACGATTGTGTTTGGTTTGGGGAGAACAGCATAATTGCAGG
GGGCCACGATTGCAACCCTGTGCTGTTCAAAGTTGAAGGGGATTGTTCAAAAGTTGCGTT
CGCCAACAAACTTGATCAACCCCCTAAAGGAGGGGGTGGGGGAAAAGCTGTGTCGGCCAT
GAATATGTTTAAGATGATGGATAAGAAAGGAACCGTAGAGGCGACTTCCACTGATCTTAC
TACAAAGCATAAGAACGCAATCATACAGGTATGCGTGTACGGGCCACACCAGTTCTCAAC
ATGTGGTAAAGATGGAAACGTTGTTGTTTGGGACAACAAGTCACTTGAAGCATCTATTGC
TGGTCTTCGAATTAATTAATATGTAACAATGGAGTGATCATGCCTATTATTACATCATAA
TCAACTATTATTACATCATAATCAACTATACCATTCAAGAAACAATAAAGAGAATGAACA
CATAACGAGAAAAAATAAAACCCAAACTCGGAATCCAGCGTTGTTCTTTATTGCCTGTAA
TATATTATTTCTATGAATATCATGTATAATTTATAAGATATCTATCCCACCTCTCGTAAC
TCCTCGTTCCCATCTTTAACATTTTCCGAACTTTCAACGATTTTTTCCGAAACAAGTTCG
ATGTCCGCTTCTTGTTGGAAAACCTGGGGTGGGGAGGTTAATGAATGACTAATTATTATT
TCTTCCAATGATAATATTGGAGAGAATTAGCAGCAAAACAACACTTGTTAAATTAATGAC
CAACCTGTTCGCTAAACATCTCGTGCAACTTTGCGATCTCGACAACTTTTCCACCGATGG
AACGAACTTCATCGCTCAATGAATTCATGTCTGATAATAATTGGGCATTTTCCTGTGCAA
ACTGTAATGTATAGTAGGGTGGCGTGTTATACACCTCATGCTCATTGGACACTGTAGGTG
CCCAGCATAAGTATGTTAAACATAAGGTTCATGATTTGGCAATGATCAGCATTACATTAA
AAGTTTGGCGTATATGTTATATATACTCCATATAAGATCCCACTAACCGTCTCATCATCA
TCTGGGACCAAACCATCGTCATCGCTTTCCTCAAACAAATACTTTGGATTATGCTTTACT
TGACCCGGCAATCTTTCTGAACTTTTTGCTCGAGTCGAATTCAAGCGCAACTGTGACCTA
AACAATACATTTGATGATGTCACAATCCCACCCATTATCATCCAACAATGACCATTATTA
CTCACACAGTGTTTCGTTCAACAATCTGTTTCACCCGAACCGATTTCTGTTCGTTATAAA
| PANTHER |
ARPC1 (IPR017383) - T[28-123] 9.0E-39 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[31-129] 1.2E-34 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[35-200] 1.56E-16 |
| SMART |
WD40_repeat (IPR001680) - T[73-112] 1.7E-6 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[80-121] 12.58 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[80-121] 11.787 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 60.465 % | 116 | 5.24E-31 |
| ARC1B_HUMAN | 60.92 % | 118 | 1.15E-31 |