- Transcript 'KH2012:KH.S988.1.v1....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v1.A.SL8-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,482 / 15,548]
Amino acid sequence
Length: 401
>KH.S988.1.v1.A.SL8-1
FIVASFVERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIA
LSPNSNDVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNG
EWVQELVILRINRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRST
IVSLDWHPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTG
WVHGIAFSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGGHDC
NPVLFKVEGDCSKVAFANKLDQPPKGGGGGKAVSAMNMFKMMDKKGTVEATSTDLTTKHK
NAIIQVCVYGPHQFSTCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 2,149
>KH2012:KH.S988.1.v1.A.SL8-1
ATTTTATTGTCGCCAGTTTCGTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGTAG
ACTGTCCAGAGTCCACGAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTT
TTAACTTTGGGGTTCACCCCATTAGTTGTCATTCATGGAATCATGACCGCACGCAAATTG
CTTTGAGTCCAAACAGCAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATC
ATATTCATACATTAAGCGAACATACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGA
CGAACCGTATTGTTACGTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAACG
GGGAATGGGTGCAAGAATTGGTGATTCTTCGTATTAATCGAGCAGCGACGTACGTACGAT
GGTCGCCACAGGAAGATAAGTTTGCTGTCGGAAGTTCATCACGCATGATTTCCGTTTGCT
ACTTTGAGTCCGATAATAATTGGTGGGTGAGCAAACATATCAAGAAACCTATCAGATCCA
CCATTGTTTCGTTGGATTGGCATCCGAACAACATTTTACTCGCGGCTGGTTGTTGCGATT
ACAAAGCTTACGTGTTCTCGGCTTACATCAAAGAAATCAATCCAAAACCTGGTCCTACAG
TTTGGGGGAAGAAGATGACGTTTGGATGTTTGATGCAGGAGTTTGTGATGCCTTGTACTG
GATGGGTTCACGGAATCGCATTTTCAAACTCTGGCGATTGTTTAGCGATGGTGTCCCACG
GCAGTGTGCTCTCTGTCGCCAAAGGTGGTGGAGAATTAACATCAATCAGGACGGAGTTTC
TTCCATTTAACGATTGTGTTTGGTTTGGGGAGAACAGCATAATTGCAGGGGGCCACGATT
GCAACCCTGTGCTGTTCAAAGTTGAAGGGGATTGTTCAAAAGTTGCGTTCGCCAACAAAC
TTGATCAACCCCCTAAAGGAGGGGGTGGGGGAAAAGCTGTGTCGGCCATGAATATGTTTA
AGATGATGGATAAGAAAGGAACCGTAGAGGCGACTTCCACTGATCTTACTACAAAGCATA
AGAACGCAATCATACAGGTATGCGTGTACGGGCCACACCAGTTCTCAACATGTGGTAAAG
ATGGAAACGTTGTTGTTTGGGACAACAAGTCACTTGAAGCATCTATTGCTGGTCTTCGAA
TTAATTAATATGTAACAATGGAGTGATCATGCCTATTATTACATCATAATCAACTATTAT
TACATCATAATCAACTATACCATTCAAGAAACAATAAAGAGAATGAACACATAACGAGAA
AAAATAAAACCCAAACTCGGAATCCAGCGTTGTTCTTTATTGCCTGTAATATATTATTTC
TATGAATATCATGTATAATTTATAAGATATCTATCCCACCTCTCGTAACTCCTCGTTCCC
ATCTTTAACATTTTCCGAACTTTCAACGATTTTTTCCGAAACAAGTTCGATGTCCGCTTC
TTGTTGGAAAACCTGGGGTGGGGAGGTTAATGAATGACTAATTATTATTTCTTCCAATGA
TAATATTGGAGAGAATTAGCAGCAAAACAACACTTGTTAAATTAATGACCAACCTGTTCG
CTAAACATCTCGTGCAACTTTGCGATCTCGACAACTTTTCCACCGATGGAACGAACTTCA
TCGCTCAATGAATTCATGTCTGATAATAATTGGGCATTTTCCTGTGCAAACTGTAATGTA
TAGTAGGGTGGCGTGTTATACACCTCATGCTCATTGGACACTGTAGGTGCCCAGCATAAG
TATGTTAAACATAAGGTTCATGATTTGGCAATGATCAGCATTACATTAAAAGTTTGGCGT
ATATGTTATATATACTCCATATAAGATCCCACTAACCGTCTCATCATCATCTGGGACCAA
ACCATCGTCATCGCTTTCCTCAAACAAATACTTTGGATTATGCTTTACTTGACCCGGCAA
TCTTTCTGAACTTTTTGCTCGAGTCGAATTCAAGCGCAACTGTGACCTAAACAATACATT
TGATGATGTCACAATCCCACCCATTATCATCCAACAATGACCATTATTACTCACACAGTG
TTTCGTTCAACAATCTGTTTCACCCGAACCGATTTCTGTTCGTTATAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[35-387] 2.8E-141 |
| PIRSF |
ARPC1 (IPR017383) - T[35-393] 2.9E-143 |
| PANTHER |
ARPC1 (IPR017383) - T[38-399] 6.7E-149 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[39-319] 3.85E-43 - T[347-391] 3.85E-43 |
| SMART |
WD40_repeat (IPR001680) - T[77-116] 1.7E-6 - T[121-160] 80.0 - T[170-206] 3.0 - T[231-267] 180.0 - T[345-387] 1.3 |
| Pfam |
WD40_repeat (IPR001680) - T[79-115] 9.5E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[84-125] 12.58 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[84-125] 11.787 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 56.486 % | 417 | 2.39E-145 |
| ARC1B_HUMAN | 51.892 % | 385 | 1.04E-132 |