- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.L152.13.v1...' >
- Transcript 'Mooccu.CG.ELv1_2.S64...' >
- Transcript 'KH2012:KH.S988.1.v1....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v1.A.SL2-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,498 / 15,548]
Amino acid sequence
Length: 396
>KH.S988.1.v1.A.SL2-1
FVERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIALSPNS
NDVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGEWVQE
LVILRINRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRSTIVSLD
WHPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTGWVHGI
AFSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGGHDCNPVLF
KVEGDCSKVAFANKLDQPPKGGGGGKAVSAMNMFKMMDKKGTVEATSTDLTTKHKNAIIQ
VCVYGPHQFSTCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 2,133
>KH2012:KH.S988.1.v1.A.SL2-1
TTTCGTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGTAGACTGTCCAGAGTCCAC
GAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTTTTAACTTTGGGGTTCA
CCCCATTAGTTGTCATTCATGGAATCATGACCGCACGCAAATTGCTTTGAGTCCAAACAG
CAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATCATATTCATACATTAAG
CGAACATACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGACGAACCGTATTGTTAC
GTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAACGGGGAATGGGTGCAAGA
ATTGGTGATTCTTCGTATTAATCGAGCAGCGACGTACGTACGATGGTCGCCACAGGAAGA
TAAGTTTGCTGTCGGAAGTTCATCACGCATGATTTCCGTTTGCTACTTTGAGTCCGATAA
TAATTGGTGGGTGAGCAAACATATCAAGAAACCTATCAGATCCACCATTGTTTCGTTGGA
TTGGCATCCGAACAACATTTTACTCGCGGCTGGTTGTTGCGATTACAAAGCTTACGTGTT
CTCGGCTTACATCAAAGAAATCAATCCAAAACCTGGTCCTACAGTTTGGGGGAAGAAGAT
GACGTTTGGATGTTTGATGCAGGAGTTTGTGATGCCTTGTACTGGATGGGTTCACGGAAT
CGCATTTTCAAACTCTGGCGATTGTTTAGCGATGGTGTCCCACGGCAGTGTGCTCTCTGT
CGCCAAAGGTGGTGGAGAATTAACATCAATCAGGACGGAGTTTCTTCCATTTAACGATTG
TGTTTGGTTTGGGGAGAACAGCATAATTGCAGGGGGCCACGATTGCAACCCTGTGCTGTT
CAAAGTTGAAGGGGATTGTTCAAAAGTTGCGTTCGCCAACAAACTTGATCAACCCCCTAA
AGGAGGGGGTGGGGGAAAAGCTGTGTCGGCCATGAATATGTTTAAGATGATGGATAAGAA
AGGAACCGTAGAGGCGACTTCCACTGATCTTACTACAAAGCATAAGAACGCAATCATACA
GGTATGCGTGTACGGGCCACACCAGTTCTCAACATGTGGTAAAGATGGAAACGTTGTTGT
TTGGGACAACAAGTCACTTGAAGCATCTATTGCTGGTCTTCGAATTAATTAATATGTAAC
AATGGAGTGATCATGCCTATTATTACATCATAATCAACTATTATTACATCATAATCAACT
ATACCATTCAAGAAACAATAAAGAGAATGAACACATAACGAGAAAAAATAAAACCCAAAC
TCGGAATCCAGCGTTGTTCTTTATTGCCTGTAATATATTATTTCTATGAATATCATGTAT
AATTTATAAGATATCTATCCCACCTCTCGTAACTCCTCGTTCCCATCTTTAACATTTTCC
GAACTTTCAACGATTTTTTCCGAAACAAGTTCGATGTCCGCTTCTTGTTGGAAAACCTGG
GGTGGGGAGGTTAATGAATGACTAATTATTATTTCTTCCAATGATAATATTGGAGAGAAT
TAGCAGCAAAACAACACTTGTTAAATTAATGACCAACCTGTTCGCTAAACATCTCGTGCA
ACTTTGCGATCTCGACAACTTTTCCACCGATGGAACGAACTTCATCGCTCAATGAATTCA
TGTCTGATAATAATTGGGCATTTTCCTGTGCAAACTGTAATGTATAGTAGGGTGGCGTGT
TATACACCTCATGCTCATTGGACACTGTAGGTGCCCAGCATAAGTATGTTAAACATAAGG
TTCATGATTTGGCAATGATCAGCATTACATTAAAAGTTTGGCGTATATGTTATATATACT
CCATATAAGATCCCACTAACCGTCTCATCATCATCTGGGACCAAACCATCGTCATCGCTT
TCCTCAAACAAATACTTTGGATTATGCTTTACTTGACCCGGCAATCTTTCTGAACTTTTT
GCTCGAGTCGAATTCAAGCGCAACTGTGACCTAAACAATACATTTGATGATGTCACAATC
CCACCCATTATCATCCAACAATGACCATTATTACTCACACAGTGTTTCGTTCAACAATCT
GTTTCACCCGAACCGATTTCTGTTCGTTATAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[30-382] 2.7E-141 |
| PIRSF |
ARPC1 (IPR017383) - T[30-388] 2.7E-143 |
| PANTHER |
ARPC1 (IPR017383) - T[33-394] 6.4E-149 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[35-314] 3.94E-43 - T[342-386] 3.94E-43 |
| SMART |
WD40_repeat (IPR001680) - T[72-111] 1.7E-6 - T[116-155] 80.0 - T[165-201] 3.0 - T[226-262] 180.0 - T[340-382] 1.3 |
| Pfam |
WD40_repeat (IPR001680) - T[74-110] 9.3E-4 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[79-120] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[79-120] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 56.486 % | 417 | 1.95E-145 |
| ARC1B_HUMAN | 51.892 % | 384 | 1.14E-132 |