- Transcript 'KH2012:KH.S988.1.v1....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v1.A.nonSL9-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,476 / 15,548]
Amino acid sequence
Length: 403
>KH.S988.1.v1.A.nonSL9-1
SDFIVASFVERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQ
IALSPNSNDVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLT
NGEWVQELVILRINRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIR
STIVSLDWHPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPC
TGWVHGIAFSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGGH
DCNPVLFKVEGDCSKVAFANKLDQPPKGGGGGKAVSAMNMFKMMDKKGTVEATSTDLTTK
HKNAIIQVCVYGPHQFSTCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 2,155
>KH2012:KH.S988.1.v1.A.nonSL9-1
AATCAGATTTTATTGTCGCCAGTTTCGTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTC
GTGTAGACTGTCCAGAGTCCACGAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTG
AAGTTTTTAACTTTGGGGTTCACCCCATTAGTTGTCATTCATGGAATCATGACCGCACGC
AAATTGCTTTGAGTCCAAACAGCAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAAT
GGGATCATATTCATACATTAAGCGAACATACACTTAAAGTTACAGACATCGATTGGGCCC
CGAAGACGAACCGTATTGTTACGTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTA
CTAACGGGGAATGGGTGCAAGAATTGGTGATTCTTCGTATTAATCGAGCAGCGACGTACG
TACGATGGTCGCCACAGGAAGATAAGTTTGCTGTCGGAAGTTCATCACGCATGATTTCCG
TTTGCTACTTTGAGTCCGATAATAATTGGTGGGTGAGCAAACATATCAAGAAACCTATCA
GATCCACCATTGTTTCGTTGGATTGGCATCCGAACAACATTTTACTCGCGGCTGGTTGTT
GCGATTACAAAGCTTACGTGTTCTCGGCTTACATCAAAGAAATCAATCCAAAACCTGGTC
CTACAGTTTGGGGGAAGAAGATGACGTTTGGATGTTTGATGCAGGAGTTTGTGATGCCTT
GTACTGGATGGGTTCACGGAATCGCATTTTCAAACTCTGGCGATTGTTTAGCGATGGTGT
CCCACGGCAGTGTGCTCTCTGTCGCCAAAGGTGGTGGAGAATTAACATCAATCAGGACGG
AGTTTCTTCCATTTAACGATTGTGTTTGGTTTGGGGAGAACAGCATAATTGCAGGGGGCC
ACGATTGCAACCCTGTGCTGTTCAAAGTTGAAGGGGATTGTTCAAAAGTTGCGTTCGCCA
ACAAACTTGATCAACCCCCTAAAGGAGGGGGTGGGGGAAAAGCTGTGTCGGCCATGAATA
TGTTTAAGATGATGGATAAGAAAGGAACCGTAGAGGCGACTTCCACTGATCTTACTACAA
AGCATAAGAACGCAATCATACAGGTATGCGTGTACGGGCCACACCAGTTCTCAACATGTG
GTAAAGATGGAAACGTTGTTGTTTGGGACAACAAGTCACTTGAAGCATCTATTGCTGGTC
TTCGAATTAATTAATATGTAACAATGGAGTGATCATGCCTATTATTACATCATAATCAAC
TATTATTACATCATAATCAACTATACCATTCAAGAAACAATAAAGAGAATGAACACATAA
CGAGAAAAAATAAAACCCAAACTCGGAATCCAGCGTTGTTCTTTATTGCCTGTAATATAT
TATTTCTATGAATATCATGTATAATTTATAAGATATCTATCCCACCTCTCGTAACTCCTC
GTTCCCATCTTTAACATTTTCCGAACTTTCAACGATTTTTTCCGAAACAAGTTCGATGTC
CGCTTCTTGTTGGAAAACCTGGGGTGGGGAGGTTAATGAATGACTAATTATTATTTCTTC
CAATGATAATATTGGAGAGAATTAGCAGCAAAACAACACTTGTTAAATTAATGACCAACC
TGTTCGCTAAACATCTCGTGCAACTTTGCGATCTCGACAACTTTTCCACCGATGGAACGA
ACTTCATCGCTCAATGAATTCATGTCTGATAATAATTGGGCATTTTCCTGTGCAAACTGT
AATGTATAGTAGGGTGGCGTGTTATACACCTCATGCTCATTGGACACTGTAGGTGCCCAG
CATAAGTATGTTAAACATAAGGTTCATGATTTGGCAATGATCAGCATTACATTAAAAGTT
TGGCGTATATGTTATATATACTCCATATAAGATCCCACTAACCGTCTCATCATCATCTGG
GACCAAACCATCGTCATCGCTTTCCTCAAACAAATACTTTGGATTATGCTTTACTTGACC
CGGCAATCTTTCTGAACTTTTTGCTCGAGTCGAATTCAAGCGCAACTGTGACCTAAACAA
TACATTTGATGATGTCACAATCCCACCCATTATCATCCAACAATGACCATTATTACTCAC
ACAGTGTTTCGTTCAACAATCTGTTTCACCCGAACCGATTTCTGTTCGTTATAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[37-389] 2.9E-141 |
| PIRSF |
ARPC1 (IPR017383) - T[37-395] 2.9E-143 |
| PANTHER |
ARPC1 (IPR017383) - T[40-401] 6.8E-149 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[41-321] 4.3E-43 - T[349-393] 4.3E-43 |
| SMART |
WD40_repeat (IPR001680) - T[79-118] 1.7E-6 - T[123-162] 80.0 - T[172-208] 3.0 - T[233-269] 180.0 - T[347-389] 1.3 |
| Pfam |
WD40_repeat (IPR001680) - T[81-117] 9.5E-4 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[86-127] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[86-127] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 56.486 % | 417 | 3.0E-145 |
| ARC1B_HUMAN | 51.892 % | 385 | 1.33E-132 |