- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Mooccu.CG.ELv1_2.S64...' >
- Clone 'cien123249' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.S988.1.v1....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v1.A.nonSL6-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,487 / 15,548]
Amino acid sequence
Length: 400
>KH.S988.1.v1.A.nonSL6-1
IVASFVERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIAL
SPNSNDVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGE
WVQELVILRINRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRSTI
VSLDWHPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTGW
VHGIAFSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGGHDCN
PVLFKVEGDCSKVAFANKLDQPPKGGGGGKAVSAMNMFKMMDKKGTVEATSTDLTTKHKN
AIIQVCVYGPHQFSTCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 2,144
>KH2012:KH.S988.1.v1.A.nonSL6-1
ATTGTCGCCAGTTTCGTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGTAGACTGT
CCAGAGTCCACGAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTTTTAAC
TTTGGGGTTCACCCCATTAGTTGTCATTCATGGAATCATGACCGCACGCAAATTGCTTTG
AGTCCAAACAGCAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATCATATT
CATACATTAAGCGAACATACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGACGAAC
CGTATTGTTACGTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAACGGGGAA
TGGGTGCAAGAATTGGTGATTCTTCGTATTAATCGAGCAGCGACGTACGTACGATGGTCG
CCACAGGAAGATAAGTTTGCTGTCGGAAGTTCATCACGCATGATTTCCGTTTGCTACTTT
GAGTCCGATAATAATTGGTGGGTGAGCAAACATATCAAGAAACCTATCAGATCCACCATT
GTTTCGTTGGATTGGCATCCGAACAACATTTTACTCGCGGCTGGTTGTTGCGATTACAAA
GCTTACGTGTTCTCGGCTTACATCAAAGAAATCAATCCAAAACCTGGTCCTACAGTTTGG
GGGAAGAAGATGACGTTTGGATGTTTGATGCAGGAGTTTGTGATGCCTTGTACTGGATGG
GTTCACGGAATCGCATTTTCAAACTCTGGCGATTGTTTAGCGATGGTGTCCCACGGCAGT
GTGCTCTCTGTCGCCAAAGGTGGTGGAGAATTAACATCAATCAGGACGGAGTTTCTTCCA
TTTAACGATTGTGTTTGGTTTGGGGAGAACAGCATAATTGCAGGGGGCCACGATTGCAAC
CCTGTGCTGTTCAAAGTTGAAGGGGATTGTTCAAAAGTTGCGTTCGCCAACAAACTTGAT
CAACCCCCTAAAGGAGGGGGTGGGGGAAAAGCTGTGTCGGCCATGAATATGTTTAAGATG
ATGGATAAGAAAGGAACCGTAGAGGCGACTTCCACTGATCTTACTACAAAGCATAAGAAC
GCAATCATACAGGTATGCGTGTACGGGCCACACCAGTTCTCAACATGTGGTAAAGATGGA
AACGTTGTTGTTTGGGACAACAAGTCACTTGAAGCATCTATTGCTGGTCTTCGAATTAAT
TAATATGTAACAATGGAGTGATCATGCCTATTATTACATCATAATCAACTATTATTACAT
CATAATCAACTATACCATTCAAGAAACAATAAAGAGAATGAACACATAACGAGAAAAAAT
AAAACCCAAACTCGGAATCCAGCGTTGTTCTTTATTGCCTGTAATATATTATTTCTATGA
ATATCATGTATAATTTATAAGATATCTATCCCACCTCTCGTAACTCCTCGTTCCCATCTT
TAACATTTTCCGAACTTTCAACGATTTTTTCCGAAACAAGTTCGATGTCCGCTTCTTGTT
GGAAAACCTGGGGTGGGGAGGTTAATGAATGACTAATTATTATTTCTTCCAATGATAATA
TTGGAGAGAATTAGCAGCAAAACAACACTTGTTAAATTAATGACCAACCTGTTCGCTAAA
CATCTCGTGCAACTTTGCGATCTCGACAACTTTTCCACCGATGGAACGAACTTCATCGCT
CAATGAATTCATGTCTGATAATAATTGGGCATTTTCCTGTGCAAACTGTAATGTATAGTA
GGGTGGCGTGTTATACACCTCATGCTCATTGGACACTGTAGGTGCCCAGCATAAGTATGT
TAAACATAAGGTTCATGATTTGGCAATGATCAGCATTACATTAAAAGTTTGGCGTATATG
TTATATATACTCCATATAAGATCCCACTAACCGTCTCATCATCATCTGGGACCAAACCAT
CGTCATCGCTTTCCTCAAACAAATACTTTGGATTATGCTTTACTTGACCCGGCAATCTTT
CTGAACTTTTTGCTCGAGTCGAATTCAAGCGCAACTGTGACCTAAACAATACATTTGATG
ATGTCACAATCCCACCCATTATCATCCAACAATGACCATTATTACTCACACAGTGTTTCG
TTCAACAATCTGTTTCACCCGAACCGATTTCTGTTCGTTATAAA
| PIRSF |
ARPC1 (IPR017383) - T[34-392] 2.7E-143 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[34-386] 2.8E-141 |
| PANTHER |
ARPC1 (IPR017383) - T[37-398] 6.6E-149 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[38-318] 3.85E-43 - T[346-390] 3.85E-43 |
| SMART |
WD40_repeat (IPR001680) - T[76-115] 1.7E-6 - T[120-159] 80.0 - T[169-205] 3.0 - T[230-266] 180.0 - T[344-386] 1.3 |
| Pfam |
WD40_repeat (IPR001680) - T[78-114] 9.4E-4 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[83-124] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[83-124] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 56.486 % | 417 | 2.33E-145 |
| ARC1B_HUMAN | 51.892 % | 385 | 8.79E-133 |