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- Transcript 'KH2012:KH.S988.1.v3....' >
- Transcript 'KH2012:KH.S988.1.v1....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v1.A.nonSL5-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,502 / 15,548]
Amino acid sequence
Length: 395
>KH.S988.1.v1.A.nonSL5-1
VERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIALSPNSN
DVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGEWVQEL
VILRINRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRSTIVSLDW
HPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTGWVHGIA
FSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGGHDCNPVLFK
VEGDCSKVAFANKLDQPPKGGGGGKAVSAMNMFKMMDKKGTVEATSTDLTTKHKNAIIQV
CVYGPHQFSTCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 2,129
>KH2012:KH.S988.1.v1.A.nonSL5-1
GTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGTAGACTGTCCAGAGTCCACGAAC
TTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTTTTAACTTTGGGGTTCACCCC
ATTAGTTGTCATTCATGGAATCATGACCGCACGCAAATTGCTTTGAGTCCAAACAGCAAC
GATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATCATATTCATACATTAAGCGAA
CATACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGACGAACCGTATTGTTACGTGC
GGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAACGGGGAATGGGTGCAAGAATTG
GTGATTCTTCGTATTAATCGAGCAGCGACGTACGTACGATGGTCGCCACAGGAAGATAAG
TTTGCTGTCGGAAGTTCATCACGCATGATTTCCGTTTGCTACTTTGAGTCCGATAATAAT
TGGTGGGTGAGCAAACATATCAAGAAACCTATCAGATCCACCATTGTTTCGTTGGATTGG
CATCCGAACAACATTTTACTCGCGGCTGGTTGTTGCGATTACAAAGCTTACGTGTTCTCG
GCTTACATCAAAGAAATCAATCCAAAACCTGGTCCTACAGTTTGGGGGAAGAAGATGACG
TTTGGATGTTTGATGCAGGAGTTTGTGATGCCTTGTACTGGATGGGTTCACGGAATCGCA
TTTTCAAACTCTGGCGATTGTTTAGCGATGGTGTCCCACGGCAGTGTGCTCTCTGTCGCC
AAAGGTGGTGGAGAATTAACATCAATCAGGACGGAGTTTCTTCCATTTAACGATTGTGTT
TGGTTTGGGGAGAACAGCATAATTGCAGGGGGCCACGATTGCAACCCTGTGCTGTTCAAA
GTTGAAGGGGATTGTTCAAAAGTTGCGTTCGCCAACAAACTTGATCAACCCCCTAAAGGA
GGGGGTGGGGGAAAAGCTGTGTCGGCCATGAATATGTTTAAGATGATGGATAAGAAAGGA
ACCGTAGAGGCGACTTCCACTGATCTTACTACAAAGCATAAGAACGCAATCATACAGGTA
TGCGTGTACGGGCCACACCAGTTCTCAACATGTGGTAAAGATGGAAACGTTGTTGTTTGG
GACAACAAGTCACTTGAAGCATCTATTGCTGGTCTTCGAATTAATTAATATGTAACAATG
GAGTGATCATGCCTATTATTACATCATAATCAACTATTATTACATCATAATCAACTATAC
CATTCAAGAAACAATAAAGAGAATGAACACATAACGAGAAAAAATAAAACCCAAACTCGG
AATCCAGCGTTGTTCTTTATTGCCTGTAATATATTATTTCTATGAATATCATGTATAATT
TATAAGATATCTATCCCACCTCTCGTAACTCCTCGTTCCCATCTTTAACATTTTCCGAAC
TTTCAACGATTTTTTCCGAAACAAGTTCGATGTCCGCTTCTTGTTGGAAAACCTGGGGTG
GGGAGGTTAATGAATGACTAATTATTATTTCTTCCAATGATAATATTGGAGAGAATTAGC
AGCAAAACAACACTTGTTAAATTAATGACCAACCTGTTCGCTAAACATCTCGTGCAACTT
TGCGATCTCGACAACTTTTCCACCGATGGAACGAACTTCATCGCTCAATGAATTCATGTC
TGATAATAATTGGGCATTTTCCTGTGCAAACTGTAATGTATAGTAGGGTGGCGTGTTATA
CACCTCATGCTCATTGGACACTGTAGGTGCCCAGCATAAGTATGTTAAACATAAGGTTCA
TGATTTGGCAATGATCAGCATTACATTAAAAGTTTGGCGTATATGTTATATATACTCCAT
ATAAGATCCCACTAACCGTCTCATCATCATCTGGGACCAAACCATCGTCATCGCTTTCCT
CAAACAAATACTTTGGATTATGCTTTACTTGACCCGGCAATCTTTCTGAACTTTTTGCTC
GAGTCGAATTCAAGCGCAACTGTGACCTAAACAATACATTTGATGATGTCACAATCCCAC
CCATTATCATCCAACAATGACCATTATTACTCACACAGTGTTTCGTTCAACAATCTGTTT
CACCCGAACCGATTTCTGTTCGTTATAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[29-381] 2.7E-141 |
| PIRSF |
ARPC1 (IPR017383) - T[29-387] 2.7E-143 |
| PANTHER |
ARPC1 (IPR017383) - T[32-393] 6.3E-149 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[34-313] 3.75E-43 - T[341-385] 3.75E-43 |
| SMART |
WD40_repeat (IPR001680) - T[71-110] 1.7E-6 - T[115-154] 80.0 - T[164-200] 3.0 - T[225-261] 180.0 - T[339-381] 1.3 |
| Pfam |
WD40_repeat (IPR001680) - T[73-109] 9.3E-4 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[78-119] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[78-119] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 56.486 % | 417 | 1.84E-145 |
| ARC1B_HUMAN | 51.892 % | 384 | 1.06E-132 |