- Transcript 'KH2012:KH.S988.1.v3....' >
- Transcript 'KH2012:KH.S988.1.v1....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v1.A.nonSL4-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,527 / 15,548]
Amino acid sequence
Length: 386
>KH.S988.1.v1.A.nonSL4-1
FVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIALSPNSNDVLIYKKSG
KKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGEWVQELVILRINRAA
TYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRSTIVSLDWHPNNILLAA
GCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTGWVHGIAFSNSGDCLA
MVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGGHDCNPVLFKVEGDCSKVA
FANKLDQPPKGGGGGKAVSAMNMFKMMDKKGTVEATSTDLTTKHKNAIIQVCVYGPHQFS
TCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 2,104
>KH2012:KH.S988.1.v1.A.nonSL4-1
GTTTTGTTCGTGTAGACTGTCCAGAGTCCACGAACTTTTTATTCATACATTCCGTTGTAA
AAATGGGTGAAGTTTTTAACTTTGGGGTTCACCCCATTAGTTGTCATTCATGGAATCATG
ACCGCACGCAAATTGCTTTGAGTCCAAACAGCAACGATGTTTTGATTTACAAGAAATCCG
GGAAGAAATGGGATCATATTCATACATTAAGCGAACATACACTTAAAGTTACAGACATCG
ATTGGGCCCCGAAGACGAACCGTATTGTTACGTGCGGTGCCGACAGAAACGCCTATGTTT
GGCAACTTACTAACGGGGAATGGGTGCAAGAATTGGTGATTCTTCGTATTAATCGAGCAG
CGACGTACGTACGATGGTCGCCACAGGAAGATAAGTTTGCTGTCGGAAGTTCATCACGCA
TGATTTCCGTTTGCTACTTTGAGTCCGATAATAATTGGTGGGTGAGCAAACATATCAAGA
AACCTATCAGATCCACCATTGTTTCGTTGGATTGGCATCCGAACAACATTTTACTCGCGG
CTGGTTGTTGCGATTACAAAGCTTACGTGTTCTCGGCTTACATCAAAGAAATCAATCCAA
AACCTGGTCCTACAGTTTGGGGGAAGAAGATGACGTTTGGATGTTTGATGCAGGAGTTTG
TGATGCCTTGTACTGGATGGGTTCACGGAATCGCATTTTCAAACTCTGGCGATTGTTTAG
CGATGGTGTCCCACGGCAGTGTGCTCTCTGTCGCCAAAGGTGGTGGAGAATTAACATCAA
TCAGGACGGAGTTTCTTCCATTTAACGATTGTGTTTGGTTTGGGGAGAACAGCATAATTG
CAGGGGGCCACGATTGCAACCCTGTGCTGTTCAAAGTTGAAGGGGATTGTTCAAAAGTTG
CGTTCGCCAACAAACTTGATCAACCCCCTAAAGGAGGGGGTGGGGGAAAAGCTGTGTCGG
CCATGAATATGTTTAAGATGATGGATAAGAAAGGAACCGTAGAGGCGACTTCCACTGATC
TTACTACAAAGCATAAGAACGCAATCATACAGGTATGCGTGTACGGGCCACACCAGTTCT
CAACATGTGGTAAAGATGGAAACGTTGTTGTTTGGGACAACAAGTCACTTGAAGCATCTA
TTGCTGGTCTTCGAATTAATTAATATGTAACAATGGAGTGATCATGCCTATTATTACATC
ATAATCAACTATTATTACATCATAATCAACTATACCATTCAAGAAACAATAAAGAGAATG
AACACATAACGAGAAAAAATAAAACCCAAACTCGGAATCCAGCGTTGTTCTTTATTGCCT
GTAATATATTATTTCTATGAATATCATGTATAATTTATAAGATATCTATCCCACCTCTCG
TAACTCCTCGTTCCCATCTTTAACATTTTCCGAACTTTCAACGATTTTTTCCGAAACAAG
TTCGATGTCCGCTTCTTGTTGGAAAACCTGGGGTGGGGAGGTTAATGAATGACTAATTAT
TATTTCTTCCAATGATAATATTGGAGAGAATTAGCAGCAAAACAACACTTGTTAAATTAA
TGACCAACCTGTTCGCTAAACATCTCGTGCAACTTTGCGATCTCGACAACTTTTCCACCG
ATGGAACGAACTTCATCGCTCAATGAATTCATGTCTGATAATAATTGGGCATTTTCCTGT
GCAAACTGTAATGTATAGTAGGGTGGCGTGTTATACACCTCATGCTCATTGGACACTGTA
GGTGCCCAGCATAAGTATGTTAAACATAAGGTTCATGATTTGGCAATGATCAGCATTACA
TTAAAAGTTTGGCGTATATGTTATATATACTCCATATAAGATCCCACTAACCGTCTCATC
ATCATCTGGGACCAAACCATCGTCATCGCTTTCCTCAAACAAATACTTTGGATTATGCTT
TACTTGACCCGGCAATCTTTCTGAACTTTTTGCTCGAGTCGAATTCAAGCGCAACTGTGA
CCTAAACAATACATTTGATGATGTCACAATCCCACCCATTATCATCCAACAATGACCATT
ATTACTCACACAGTGTTTCGTTCAACAATCTGTTTCACCCGAACCGATTTCTGTTCGTTA
TAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[20-372] 2.5E-141 |
| PIRSF |
ARPC1 (IPR017383) - T[20-378] 2.5E-143 |
| PANTHER |
ARPC1 (IPR017383) - T[23-384] 5.8E-149 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[25-304] 3.94E-43 - T[332-375] 3.94E-43 |
| SMART |
WD40_repeat (IPR001680) - T[62-101] 1.7E-6 - T[106-145] 80.0 - T[155-191] 3.0 - T[216-252] 180.0 - T[330-372] 1.3 |
| Pfam |
WD40_repeat (IPR001680) - T[64-100] 9.0E-4 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[69-110] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[69-110] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 56.486 % | 417 | 1.2E-145 |
| ARC1B_HUMAN | 51.892 % | 385 | 5.25E-133 |