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- Transcript 'KH2012:KH.S988.1.v1....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v1.A.nonSL16-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,515 / 15,548]
Amino acid sequence
Length: 390
>KH.S988.1.v1.A.nonSL16-1
CCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIALSPNSNDVLIY
KKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGEWVQELVILRI
NRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRSTIVSLDWHPNNI
LLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTGWVHGIAFSNSG
DCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGGHDCNPVLFKVEGDC
SKVAFANKLDQPPKGGGGGKAVSAMNMFKMMDKKGTVEATSTDLTTKHKNAIIQVCVYGP
HQFSTCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 2,116
>KH2012:KH.S988.1.v1.A.nonSL16-1
ATTGTTGTTGTTGTTTTGTTCGTGTAGACTGTCCAGAGTCCACGAACTTTTTATTCATAC
ATTCCGTTGTAAAAATGGGTGAAGTTTTTAACTTTGGGGTTCACCCCATTAGTTGTCATT
CATGGAATCATGACCGCACGCAAATTGCTTTGAGTCCAAACAGCAACGATGTTTTGATTT
ACAAGAAATCCGGGAAGAAATGGGATCATATTCATACATTAAGCGAACATACACTTAAAG
TTACAGACATCGATTGGGCCCCGAAGACGAACCGTATTGTTACGTGCGGTGCCGACAGAA
ACGCCTATGTTTGGCAACTTACTAACGGGGAATGGGTGCAAGAATTGGTGATTCTTCGTA
TTAATCGAGCAGCGACGTACGTACGATGGTCGCCACAGGAAGATAAGTTTGCTGTCGGAA
GTTCATCACGCATGATTTCCGTTTGCTACTTTGAGTCCGATAATAATTGGTGGGTGAGCA
AACATATCAAGAAACCTATCAGATCCACCATTGTTTCGTTGGATTGGCATCCGAACAACA
TTTTACTCGCGGCTGGTTGTTGCGATTACAAAGCTTACGTGTTCTCGGCTTACATCAAAG
AAATCAATCCAAAACCTGGTCCTACAGTTTGGGGGAAGAAGATGACGTTTGGATGTTTGA
TGCAGGAGTTTGTGATGCCTTGTACTGGATGGGTTCACGGAATCGCATTTTCAAACTCTG
GCGATTGTTTAGCGATGGTGTCCCACGGCAGTGTGCTCTCTGTCGCCAAAGGTGGTGGAG
AATTAACATCAATCAGGACGGAGTTTCTTCCATTTAACGATTGTGTTTGGTTTGGGGAGA
ACAGCATAATTGCAGGGGGCCACGATTGCAACCCTGTGCTGTTCAAAGTTGAAGGGGATT
GTTCAAAAGTTGCGTTCGCCAACAAACTTGATCAACCCCCTAAAGGAGGGGGTGGGGGAA
AAGCTGTGTCGGCCATGAATATGTTTAAGATGATGGATAAGAAAGGAACCGTAGAGGCGA
CTTCCACTGATCTTACTACAAAGCATAAGAACGCAATCATACAGGTATGCGTGTACGGGC
CACACCAGTTCTCAACATGTGGTAAAGATGGAAACGTTGTTGTTTGGGACAACAAGTCAC
TTGAAGCATCTATTGCTGGTCTTCGAATTAATTAATATGTAACAATGGAGTGATCATGCC
TATTATTACATCATAATCAACTATTATTACATCATAATCAACTATACCATTCAAGAAACA
ATAAAGAGAATGAACACATAACGAGAAAAAATAAAACCCAAACTCGGAATCCAGCGTTGT
TCTTTATTGCCTGTAATATATTATTTCTATGAATATCATGTATAATTTATAAGATATCTA
TCCCACCTCTCGTAACTCCTCGTTCCCATCTTTAACATTTTCCGAACTTTCAACGATTTT
TTCCGAAACAAGTTCGATGTCCGCTTCTTGTTGGAAAACCTGGGGTGGGGAGGTTAATGA
ATGACTAATTATTATTTCTTCCAATGATAATATTGGAGAGAATTAGCAGCAAAACAACAC
TTGTTAAATTAATGACCAACCTGTTCGCTAAACATCTCGTGCAACTTTGCGATCTCGACA
ACTTTTCCACCGATGGAACGAACTTCATCGCTCAATGAATTCATGTCTGATAATAATTGG
GCATTTTCCTGTGCAAACTGTAATGTATAGTAGGGTGGCGTGTTATACACCTCATGCTCA
TTGGACACTGTAGGTGCCCAGCATAAGTATGTTAAACATAAGGTTCATGATTTGGCAATG
ATCAGCATTACATTAAAAGTTTGGCGTATATGTTATATATACTCCATATAAGATCCCACT
AACCGTCTCATCATCATCTGGGACCAAACCATCGTCATCGCTTTCCTCAAACAAATACTT
TGGATTATGCTTTACTTGACCCGGCAATCTTTCTGAACTTTTTGCTCGAGTCGAATTCAA
GCGCAACTGTGACCTAAACAATACATTTGATGATGTCACAATCCCACCCATTATCATCCA
ACAATGACCATTATTACTCACACAGTGTTTCGTTCAACAATCTGTTTCACCCGAACCGAT
TTCTGTTCGTTATAAA
| PIRSF |
ARPC1 (IPR017383) - T[24-382] 2.6E-143 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[24-376] 2.6E-141 |
| PANTHER |
ARPC1 (IPR017383) - T[27-388] 6.1E-149 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[29-308] 4.03E-43 - T[336-379] 4.03E-43 |
| SMART |
WD40_repeat (IPR001680) - T[66-105] 1.7E-6 - T[110-149] 80.0 - T[159-195] 3.0 - T[220-256] 180.0 - T[334-376] 1.3 |
| Pfam |
WD40_repeat (IPR001680) - T[68-104] 9.1E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[73-114] 12.58 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[73-114] 11.787 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 56.486 % | 417 | 2.05E-145 |
| ARC1B_HUMAN | 51.892 % | 384 | 1.06E-132 |