- Transcript 'KH2012:KH.C9.424.v1....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.S988.1.v1....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v1.A.nonSL15-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,480 / 15,548]
Amino acid sequence
Length: 402
>KH.S988.1.v1.A.nonSL15-1
DFIVASFVERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQI
ALSPNSNDVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTN
GEWVQELVILRINRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRS
TIVSLDWHPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCT
GWVHGIAFSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGGHD
CNPVLFKVEGDCSKVAFANKLDQPPKGGGGGKAVSAMNMFKMMDKKGTVEATSTDLTTKH
KNAIIQVCVYGPHQFSTCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 2,151
>KH2012:KH.S988.1.v1.A.nonSL15-1
AGATTTTATTGTCGCCAGTTTCGTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGT
AGACTGTCCAGAGTCCACGAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGT
TTTTAACTTTGGGGTTCACCCCATTAGTTGTCATTCATGGAATCATGACCGCACGCAAAT
TGCTTTGAGTCCAAACAGCAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGA
TCATATTCATACATTAAGCGAACATACACTTAAAGTTACAGACATCGATTGGGCCCCGAA
GACGAACCGTATTGTTACGTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAA
CGGGGAATGGGTGCAAGAATTGGTGATTCTTCGTATTAATCGAGCAGCGACGTACGTACG
ATGGTCGCCACAGGAAGATAAGTTTGCTGTCGGAAGTTCATCACGCATGATTTCCGTTTG
CTACTTTGAGTCCGATAATAATTGGTGGGTGAGCAAACATATCAAGAAACCTATCAGATC
CACCATTGTTTCGTTGGATTGGCATCCGAACAACATTTTACTCGCGGCTGGTTGTTGCGA
TTACAAAGCTTACGTGTTCTCGGCTTACATCAAAGAAATCAATCCAAAACCTGGTCCTAC
AGTTTGGGGGAAGAAGATGACGTTTGGATGTTTGATGCAGGAGTTTGTGATGCCTTGTAC
TGGATGGGTTCACGGAATCGCATTTTCAAACTCTGGCGATTGTTTAGCGATGGTGTCCCA
CGGCAGTGTGCTCTCTGTCGCCAAAGGTGGTGGAGAATTAACATCAATCAGGACGGAGTT
TCTTCCATTTAACGATTGTGTTTGGTTTGGGGAGAACAGCATAATTGCAGGGGGCCACGA
TTGCAACCCTGTGCTGTTCAAAGTTGAAGGGGATTGTTCAAAAGTTGCGTTCGCCAACAA
ACTTGATCAACCCCCTAAAGGAGGGGGTGGGGGAAAAGCTGTGTCGGCCATGAATATGTT
TAAGATGATGGATAAGAAAGGAACCGTAGAGGCGACTTCCACTGATCTTACTACAAAGCA
TAAGAACGCAATCATACAGGTATGCGTGTACGGGCCACACCAGTTCTCAACATGTGGTAA
AGATGGAAACGTTGTTGTTTGGGACAACAAGTCACTTGAAGCATCTATTGCTGGTCTTCG
AATTAATTAATATGTAACAATGGAGTGATCATGCCTATTATTACATCATAATCAACTATT
ATTACATCATAATCAACTATACCATTCAAGAAACAATAAAGAGAATGAACACATAACGAG
AAAAAATAAAACCCAAACTCGGAATCCAGCGTTGTTCTTTATTGCCTGTAATATATTATT
TCTATGAATATCATGTATAATTTATAAGATATCTATCCCACCTCTCGTAACTCCTCGTTC
CCATCTTTAACATTTTCCGAACTTTCAACGATTTTTTCCGAAACAAGTTCGATGTCCGCT
TCTTGTTGGAAAACCTGGGGTGGGGAGGTTAATGAATGACTAATTATTATTTCTTCCAAT
GATAATATTGGAGAGAATTAGCAGCAAAACAACACTTGTTAAATTAATGACCAACCTGTT
CGCTAAACATCTCGTGCAACTTTGCGATCTCGACAACTTTTCCACCGATGGAACGAACTT
CATCGCTCAATGAATTCATGTCTGATAATAATTGGGCATTTTCCTGTGCAAACTGTAATG
TATAGTAGGGTGGCGTGTTATACACCTCATGCTCATTGGACACTGTAGGTGCCCAGCATA
AGTATGTTAAACATAAGGTTCATGATTTGGCAATGATCAGCATTACATTAAAAGTTTGGC
GTATATGTTATATATACTCCATATAAGATCCCACTAACCGTCTCATCATCATCTGGGACC
AAACCATCGTCATCGCTTTCCTCAAACAAATACTTTGGATTATGCTTTACTTGACCCGGC
AATCTTTCTGAACTTTTTGCTCGAGTCGAATTCAAGCGCAACTGTGACCTAAACAATACA
TTTGATGATGTCACAATCCCACCCATTATCATCCAACAATGACCATTATTACTCACACAG
TGTTTCGTTCAACAATCTGTTTCACCCGAACCGATTTCTGTTCGTTATAAA
| PIRSF |
ARPC1 (IPR017383) - T[36-394] 2.9E-143 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[36-388] 2.9E-141 |
| PANTHER |
ARPC1 (IPR017383) - T[39-400] 6.7E-149 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[40-320] 4.12E-43 - T[348-392] 4.12E-43 |
| SMART |
WD40_repeat (IPR001680) - T[78-117] 1.7E-6 - T[122-161] 80.0 - T[171-207] 3.0 - T[232-268] 180.0 - T[346-388] 1.3 |
| Pfam |
WD40_repeat (IPR001680) - T[80-116] 9.5E-4 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[85-126] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[85-126] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 56.486 % | 417 | 2.65E-145 |
| ARC1B_HUMAN | 51.892 % | 385 | 1.15E-132 |