- Transcript 'KH2012:KH.S988.1.v3....' >
- Transcript 'KH2012:KH.S988.1.v1....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v1.A.nonSL14-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,505 / 15,548]
Amino acid sequence
Length: 394
>KH.S988.1.v1.A.nonSL14-1
ERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIALSPNSND
VLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGEWVQELV
ILRINRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRSTIVSLDWH
PNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTGWVHGIAF
SNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGGHDCNPVLFKV
EGDCSKVAFANKLDQPPKGGGGGKAVSAMNMFKMMDKKGTVEATSTDLTTKHKNAIIQVC
VYGPHQFSTCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 2,126
>KH2012:KH.S988.1.v1.A.nonSL14-1
GAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGTAGACTGTCCAGAGTCCACGAACTTT
TTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTTTTAACTTTGGGGTTCACCCCATT
AGTTGTCATTCATGGAATCATGACCGCACGCAAATTGCTTTGAGTCCAAACAGCAACGAT
GTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATCATATTCATACATTAAGCGAACAT
ACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGACGAACCGTATTGTTACGTGCGGT
GCCGACAGAAACGCCTATGTTTGGCAACTTACTAACGGGGAATGGGTGCAAGAATTGGTG
ATTCTTCGTATTAATCGAGCAGCGACGTACGTACGATGGTCGCCACAGGAAGATAAGTTT
GCTGTCGGAAGTTCATCACGCATGATTTCCGTTTGCTACTTTGAGTCCGATAATAATTGG
TGGGTGAGCAAACATATCAAGAAACCTATCAGATCCACCATTGTTTCGTTGGATTGGCAT
CCGAACAACATTTTACTCGCGGCTGGTTGTTGCGATTACAAAGCTTACGTGTTCTCGGCT
TACATCAAAGAAATCAATCCAAAACCTGGTCCTACAGTTTGGGGGAAGAAGATGACGTTT
GGATGTTTGATGCAGGAGTTTGTGATGCCTTGTACTGGATGGGTTCACGGAATCGCATTT
TCAAACTCTGGCGATTGTTTAGCGATGGTGTCCCACGGCAGTGTGCTCTCTGTCGCCAAA
GGTGGTGGAGAATTAACATCAATCAGGACGGAGTTTCTTCCATTTAACGATTGTGTTTGG
TTTGGGGAGAACAGCATAATTGCAGGGGGCCACGATTGCAACCCTGTGCTGTTCAAAGTT
GAAGGGGATTGTTCAAAAGTTGCGTTCGCCAACAAACTTGATCAACCCCCTAAAGGAGGG
GGTGGGGGAAAAGCTGTGTCGGCCATGAATATGTTTAAGATGATGGATAAGAAAGGAACC
GTAGAGGCGACTTCCACTGATCTTACTACAAAGCATAAGAACGCAATCATACAGGTATGC
GTGTACGGGCCACACCAGTTCTCAACATGTGGTAAAGATGGAAACGTTGTTGTTTGGGAC
AACAAGTCACTTGAAGCATCTATTGCTGGTCTTCGAATTAATTAATATGTAACAATGGAG
TGATCATGCCTATTATTACATCATAATCAACTATTATTACATCATAATCAACTATACCAT
TCAAGAAACAATAAAGAGAATGAACACATAACGAGAAAAAATAAAACCCAAACTCGGAAT
CCAGCGTTGTTCTTTATTGCCTGTAATATATTATTTCTATGAATATCATGTATAATTTAT
AAGATATCTATCCCACCTCTCGTAACTCCTCGTTCCCATCTTTAACATTTTCCGAACTTT
CAACGATTTTTTCCGAAACAAGTTCGATGTCCGCTTCTTGTTGGAAAACCTGGGGTGGGG
AGGTTAATGAATGACTAATTATTATTTCTTCCAATGATAATATTGGAGAGAATTAGCAGC
AAAACAACACTTGTTAAATTAATGACCAACCTGTTCGCTAAACATCTCGTGCAACTTTGC
GATCTCGACAACTTTTCCACCGATGGAACGAACTTCATCGCTCAATGAATTCATGTCTGA
TAATAATTGGGCATTTTCCTGTGCAAACTGTAATGTATAGTAGGGTGGCGTGTTATACAC
CTCATGCTCATTGGACACTGTAGGTGCCCAGCATAAGTATGTTAAACATAAGGTTCATGA
TTTGGCAATGATCAGCATTACATTAAAAGTTTGGCGTATATGTTATATATACTCCATATA
AGATCCCACTAACCGTCTCATCATCATCTGGGACCAAACCATCGTCATCGCTTTCCTCAA
ACAAATACTTTGGATTATGCTTTACTTGACCCGGCAATCTTTCTGAACTTTTTGCTCGAG
TCGAATTCAAGCGCAACTGTGACCTAAACAATACATTTGATGATGTCACAATCCCACCCA
TTATCATCCAACAATGACCATTATTACTCACACAGTGTTTCGTTCAACAATCTGTTTCAC
CCGAACCGATTTCTGTTCGTTATAAA
| PIRSF |
ARPC1 (IPR017383) - T[28-386] 2.7E-143 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[28-380] 2.7E-141 |
| PANTHER |
ARPC1 (IPR017383) - T[31-392] 6.3E-149 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[33-312] 4.03E-43 - T[340-383] 4.03E-43 |
| SMART |
WD40_repeat (IPR001680) - T[70-109] 1.7E-6 - T[114-153] 80.0 - T[163-199] 3.0 - T[224-260] 180.0 - T[338-380] 1.3 |
| Pfam |
WD40_repeat (IPR001680) - T[72-108] 9.2E-4 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[77-118] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[77-118] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 56.486 % | 417 | 2.28E-145 |
| ARC1B_HUMAN | 51.892 % | 384 | 1.11E-132 |