- Transcript 'KH2012:KH.S988.1.v2....' >
- Transcript 'KH2012:KH.S988.1.v1....' >
- Clone 'cien202435' >
- Transcript 'KH2012:KH.C2.322.v1....' >
- Transcript 'KH2012:KH.S988.1.v1....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v1.A.nonSL12-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,524 / 15,548]
Amino acid sequence
Length: 387
>KH.S988.1.v1.A.nonSL12-1
CFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIALSPNSNDVLIYKKS
GKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGEWVQELVILRINRA
ATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRSTIVSLDWHPNNILLA
AGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTGWVHGIAFSNSGDCL
AMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGGHDCNPVLFKVEGDCSKV
AFANKLDQPPKGGGGGKAVSAMNMFKMMDKKGTVEATSTDLTTKHKNAIIQVCVYGPHQF
STCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 2,107
>KH2012:KH.S988.1.v1.A.nonSL12-1
GTTGTTTTGTTCGTGTAGACTGTCCAGAGTCCACGAACTTTTTATTCATACATTCCGTTG
TAAAAATGGGTGAAGTTTTTAACTTTGGGGTTCACCCCATTAGTTGTCATTCATGGAATC
ATGACCGCACGCAAATTGCTTTGAGTCCAAACAGCAACGATGTTTTGATTTACAAGAAAT
CCGGGAAGAAATGGGATCATATTCATACATTAAGCGAACATACACTTAAAGTTACAGACA
TCGATTGGGCCCCGAAGACGAACCGTATTGTTACGTGCGGTGCCGACAGAAACGCCTATG
TTTGGCAACTTACTAACGGGGAATGGGTGCAAGAATTGGTGATTCTTCGTATTAATCGAG
CAGCGACGTACGTACGATGGTCGCCACAGGAAGATAAGTTTGCTGTCGGAAGTTCATCAC
GCATGATTTCCGTTTGCTACTTTGAGTCCGATAATAATTGGTGGGTGAGCAAACATATCA
AGAAACCTATCAGATCCACCATTGTTTCGTTGGATTGGCATCCGAACAACATTTTACTCG
CGGCTGGTTGTTGCGATTACAAAGCTTACGTGTTCTCGGCTTACATCAAAGAAATCAATC
CAAAACCTGGTCCTACAGTTTGGGGGAAGAAGATGACGTTTGGATGTTTGATGCAGGAGT
TTGTGATGCCTTGTACTGGATGGGTTCACGGAATCGCATTTTCAAACTCTGGCGATTGTT
TAGCGATGGTGTCCCACGGCAGTGTGCTCTCTGTCGCCAAAGGTGGTGGAGAATTAACAT
CAATCAGGACGGAGTTTCTTCCATTTAACGATTGTGTTTGGTTTGGGGAGAACAGCATAA
TTGCAGGGGGCCACGATTGCAACCCTGTGCTGTTCAAAGTTGAAGGGGATTGTTCAAAAG
TTGCGTTCGCCAACAAACTTGATCAACCCCCTAAAGGAGGGGGTGGGGGAAAAGCTGTGT
CGGCCATGAATATGTTTAAGATGATGGATAAGAAAGGAACCGTAGAGGCGACTTCCACTG
ATCTTACTACAAAGCATAAGAACGCAATCATACAGGTATGCGTGTACGGGCCACACCAGT
TCTCAACATGTGGTAAAGATGGAAACGTTGTTGTTTGGGACAACAAGTCACTTGAAGCAT
CTATTGCTGGTCTTCGAATTAATTAATATGTAACAATGGAGTGATCATGCCTATTATTAC
ATCATAATCAACTATTATTACATCATAATCAACTATACCATTCAAGAAACAATAAAGAGA
ATGAACACATAACGAGAAAAAATAAAACCCAAACTCGGAATCCAGCGTTGTTCTTTATTG
CCTGTAATATATTATTTCTATGAATATCATGTATAATTTATAAGATATCTATCCCACCTC
TCGTAACTCCTCGTTCCCATCTTTAACATTTTCCGAACTTTCAACGATTTTTTCCGAAAC
AAGTTCGATGTCCGCTTCTTGTTGGAAAACCTGGGGTGGGGAGGTTAATGAATGACTAAT
TATTATTTCTTCCAATGATAATATTGGAGAGAATTAGCAGCAAAACAACACTTGTTAAAT
TAATGACCAACCTGTTCGCTAAACATCTCGTGCAACTTTGCGATCTCGACAACTTTTCCA
CCGATGGAACGAACTTCATCGCTCAATGAATTCATGTCTGATAATAATTGGGCATTTTCC
TGTGCAAACTGTAATGTATAGTAGGGTGGCGTGTTATACACCTCATGCTCATTGGACACT
GTAGGTGCCCAGCATAAGTATGTTAAACATAAGGTTCATGATTTGGCAATGATCAGCATT
ACATTAAAAGTTTGGCGTATATGTTATATATACTCCATATAAGATCCCACTAACCGTCTC
ATCATCATCTGGGACCAAACCATCGTCATCGCTTTCCTCAAACAAATACTTTGGATTATG
CTTTACTTGACCCGGCAATCTTTCTGAACTTTTTGCTCGAGTCGAATTCAAGCGCAACTG
TGACCTAAACAATACATTTGATGATGTCACAATCCCACCCATTATCATCCAACAATGACC
ATTATTACTCACACAGTGTTTCGTTCAACAATCTGTTTCACCCGAACCGATTTCTGTTCG
TTATAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[21-373] 2.5E-141 |
| PIRSF |
ARPC1 (IPR017383) - T[21-379] 2.5E-143 |
| PANTHER |
ARPC1 (IPR017383) - T[24-385] 5.9E-149 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[26-305] 3.85E-43 - T[333-377] 3.85E-43 |
| SMART |
WD40_repeat (IPR001680) - T[63-102] 1.7E-6 - T[107-146] 80.0 - T[156-192] 3.0 - T[217-253] 180.0 - T[331-373] 1.3 |
| Pfam |
WD40_repeat (IPR001680) - T[65-101] 9.0E-4 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[70-111] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[70-111] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 56.486 % | 417 | 1.27E-145 |
| ARC1B_HUMAN | 51.892 % | 385 | 5.5E-133 |