- Transcript 'KH2012:KH.S988.1.v1....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v1.A.nonSL10-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,496 / 15,548]
Amino acid sequence
Length: 397
>KH.S988.1.v1.A.nonSL10-1
SFVERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIALSPN
SNDVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGEWVQ
ELVILRINRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRSTIVSL
DWHPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTGWVHG
IAFSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGGHDCNPVL
FKVEGDCSKVAFANKLDQPPKGGGGGKAVSAMNMFKMMDKKGTVEATSTDLTTKHKNAII
QVCVYGPHQFSTCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 2,135
>KH2012:KH.S988.1.v1.A.nonSL10-1
AGTTTCGTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGTAGACTGTCCAGAGTCC
ACGAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTTTTAACTTTGGGGTT
CACCCCATTAGTTGTCATTCATGGAATCATGACCGCACGCAAATTGCTTTGAGTCCAAAC
AGCAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATCATATTCATACATTA
AGCGAACATACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGACGAACCGTATTGTT
ACGTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAACGGGGAATGGGTGCAA
GAATTGGTGATTCTTCGTATTAATCGAGCAGCGACGTACGTACGATGGTCGCCACAGGAA
GATAAGTTTGCTGTCGGAAGTTCATCACGCATGATTTCCGTTTGCTACTTTGAGTCCGAT
AATAATTGGTGGGTGAGCAAACATATCAAGAAACCTATCAGATCCACCATTGTTTCGTTG
GATTGGCATCCGAACAACATTTTACTCGCGGCTGGTTGTTGCGATTACAAAGCTTACGTG
TTCTCGGCTTACATCAAAGAAATCAATCCAAAACCTGGTCCTACAGTTTGGGGGAAGAAG
ATGACGTTTGGATGTTTGATGCAGGAGTTTGTGATGCCTTGTACTGGATGGGTTCACGGA
ATCGCATTTTCAAACTCTGGCGATTGTTTAGCGATGGTGTCCCACGGCAGTGTGCTCTCT
GTCGCCAAAGGTGGTGGAGAATTAACATCAATCAGGACGGAGTTTCTTCCATTTAACGAT
TGTGTTTGGTTTGGGGAGAACAGCATAATTGCAGGGGGCCACGATTGCAACCCTGTGCTG
TTCAAAGTTGAAGGGGATTGTTCAAAAGTTGCGTTCGCCAACAAACTTGATCAACCCCCT
AAAGGAGGGGGTGGGGGAAAAGCTGTGTCGGCCATGAATATGTTTAAGATGATGGATAAG
AAAGGAACCGTAGAGGCGACTTCCACTGATCTTACTACAAAGCATAAGAACGCAATCATA
CAGGTATGCGTGTACGGGCCACACCAGTTCTCAACATGTGGTAAAGATGGAAACGTTGTT
GTTTGGGACAACAAGTCACTTGAAGCATCTATTGCTGGTCTTCGAATTAATTAATATGTA
ACAATGGAGTGATCATGCCTATTATTACATCATAATCAACTATTATTACATCATAATCAA
CTATACCATTCAAGAAACAATAAAGAGAATGAACACATAACGAGAAAAAATAAAACCCAA
ACTCGGAATCCAGCGTTGTTCTTTATTGCCTGTAATATATTATTTCTATGAATATCATGT
ATAATTTATAAGATATCTATCCCACCTCTCGTAACTCCTCGTTCCCATCTTTAACATTTT
CCGAACTTTCAACGATTTTTTCCGAAACAAGTTCGATGTCCGCTTCTTGTTGGAAAACCT
GGGGTGGGGAGGTTAATGAATGACTAATTATTATTTCTTCCAATGATAATATTGGAGAGA
ATTAGCAGCAAAACAACACTTGTTAAATTAATGACCAACCTGTTCGCTAAACATCTCGTG
CAACTTTGCGATCTCGACAACTTTTCCACCGATGGAACGAACTTCATCGCTCAATGAATT
CATGTCTGATAATAATTGGGCATTTTCCTGTGCAAACTGTAATGTATAGTAGGGTGGCGT
GTTATACACCTCATGCTCATTGGACACTGTAGGTGCCCAGCATAAGTATGTTAAACATAA
GGTTCATGATTTGGCAATGATCAGCATTACATTAAAAGTTTGGCGTATATGTTATATATA
CTCCATATAAGATCCCACTAACCGTCTCATCATCATCTGGGACCAAACCATCGTCATCGC
TTTCCTCAAACAAATACTTTGGATTATGCTTTACTTGACCCGGCAATCTTTCTGAACTTT
TTGCTCGAGTCGAATTCAAGCGCAACTGTGACCTAAACAATACATTTGATGATGTCACAA
TCCCACCCATTATCATCCAACAATGACCATTATTACTCACACAGTGTTTCGTTCAACAAT
CTGTTTCACCCGAACCGATTTCTGTTCGTTATAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[31-383] 2.7E-141 |
| PIRSF |
ARPC1 (IPR017383) - T[31-389] 2.8E-143 |
| PANTHER |
ARPC1 (IPR017383) - T[34-395] 6.4E-149 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[35-315] 3.75E-43 - T[343-387] 3.75E-43 |
| SMART |
WD40_repeat (IPR001680) - T[73-112] 1.7E-6 - T[117-156] 80.0 - T[166-202] 3.0 - T[227-263] 180.0 - T[341-383] 1.3 |
| Pfam |
WD40_repeat (IPR001680) - T[75-111] 9.3E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[80-121] 12.58 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[80-121] 11.787 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 56.486 % | 417 | 2.41E-145 |
| ARC1B_HUMAN | 51.892 % | 384 | 1.26E-132 |