- Region 'REG00000654' >
- Transcript 'KH2012:KH.S816.1.v1....'
Transcript Model
Transcript Id
KH2012:KH.S816.1.v1.A.nonSL3-1
Possible name(s)
ZIC2; ZIC3; ZIC4
Gene model
Location
KhS816 [14,595 / 15,738]
Amino acid sequence
Length: 259
>KH.S816.1.v1.A.nonSL3-1
QTDHTCYWEDCSRKRKGFKAKYKLVNHIRVHTGEKPFVCPFPDCGKTFGRSENLKIHQRT
HTGERPFPCKFPGCERRFANSSDRKKHSYMHNTEKLYACKYEGCDRSYTHPSSLRKHIRM
HESNGDVIDKGSIHSPTSSCGSVEDVAREQNSIENNFVQTYLPPRFTSSPIHAPLATYDA
SESLKQKFPPIEKQAKSTEHFINHGQDMTSSLPQLNLNTASTEDCYNEYQFPQNSNSLPK
SLMPAYFDVPAHCTAHFVA
Nucleotide sequence
Length: 970
>KH2012:KH.S816.1.v1.A.nonSL3-1
ATCAAACCGACCACACCTGCTACTGGGAAGATTGTTCAAGAAAACGCAAAGGTTTCAAAG
CAAAGTACAAATTGGTGAATCATATTCGAGTTCATACTGGGGAGAAACCATTTGTTTGCC
CTTTTCCTGATTGTGGAAAAACGTTTGGAAGAAGCGAGAATTTAAAAATCCATCAAAGAA
CCCACACAGGTGAACGACCCTTTCCTTGTAAATTTCCCGGATGTGAAAGACGGTTTGCAA
ACAGTTCCGATCGTAAGAAGCATAGTTATATGCACAACACTGAAAAACTTTATGCGTGTA
AGTACGAAGGTTGCGACCGAAGCTACACTCATCCCAGTTCACTACGTAAGCACATACGTA
TGCATGAATCCAATGGTGACGTAATCGACAAAGGTTCCATTCATTCTCCCACAAGCTCGT
GTGGTTCAGTAGAAGATGTAGCTCGAGAACAAAACTCCATTGAAAATAATTTCGTTCAAA
CATATTTACCTCCACGATTTACGTCATCGCCGATTCATGCACCTTTAGCCACTTATGATG
CTTCAGAAAGTTTAAAACAAAAGTTTCCCCCTATTGAGAAGCAAGCTAAATCCACAGAAC
ATTTTATAAACCACGGACAAGATATGACATCATCTCTACCTCAATTAAACTTGAACACAG
CTTCAACCGAAGATTGTTACAACGAATATCAATTTCCTCAAAACTCCAACTCTTTACCTA
AATCACTGATGCCCGCATATTTCGATGTCCCTGCTCACTGTACAGCTCACTTCGTTGCTT
GATTGTTATATGATATCAGACTGTTTTTCCTGTCATATTGTTTTTGTAAAATATAAACTT
TTTGAAATGGCTTAACAAAATGTACCTGAACACACACCTACAACAACTTGCCGCGAAATG
GTAAAGTCAAATTTAAAACCGCAACAACCTATTTAGCAATTTAGCCAATTAAGAATGCGC
TTAGCTATAG
| SMART |
Znf_C2H2_type (IPR013087) - T[4-31] 6.0 - T[37-61] 1.0E-4 - T[67-91] 0.044 - T[97-121] 1.8E-4 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[9-36] 11.281 - T[37-66] 17.059 - T[67-96] 10.408 - T[97-126] 11.24 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[18-74] 1.79E-20 - T[78-122] 1.12E-9 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[39-61] . - T[69-91] . - T[99-121] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC4_HUMAN | 65.306 % | 206 | 1.7E-65 |
| ZIC2_HUMAN | 67.376 % | 203 | 4.73E-62 |
| ZIC3_HUMAN | 68.085 % | 204 | 2.49E-63 |