- Clone 'cien91409' >
- Clone 'cien47356' >
- Clone 'cien98228' >
- Transcript 'KH2012:KH.S598.3.v2....'
Transcript Model
Transcript Id
KH2012:KH.S598.3.v2.A.SL2-1
Possible name(s)
ADIPOQ; C1QTNF7; EDA
Gene model
Location
KhS598 [19,577 / 26,262]
Amino acid sequence
Length: 375
>KH.S598.3.v2.A.SL2-1
IWCTMDERGDISRNSISLNECPGIAENRDDEIQSIYISPSIRDIHSYRCSKSTAAQKNYG
RKHPCVSLNCVWAVSTMFLIIIVFCVGVIKYIQLSEEMEQMKKDFVSLQLELDTVRNPDA
LEMGDHSKLVGDKTPGASVPNGNSDVFVTPRERRGVTVSPRNNRADLTHNSGLHGIAGRD
GRDGRDGARGQQGPPGPLGPPGPSGASVRGPSGPRGPPGFIGPEGRPGPPGLPGKDLTSS
VLHLEGDRSPSVLSGSDGVLNHWIKSQWSSDVTFRYFQHNGSIQVQSPGTYYIYSQLLTV
DSSTDILSHEVKINGNTFLRCERISQRSTCFTSGVRRMNKYDNVYLSTKYPQTTVDMTPD
VSFFGMVQWSSHDEL
Nucleotide sequence
Length: 1,930
>KH2012:KH.S598.3.v2.A.SL2-1
GAATCTGGTGTACCATGGATGAAAGAGGTGATATATCACGCAATAGCATTTCCCTGAATG
AGTGCCCTGGAATAGCTGAGAACAGAGATGATGAAATACAAAGCATTTACATTTCACCAT
CCATTAGAGATATTCATAGTTATCGATGCTCAAAATCCACTGCTGCTCAAAAAAACTATG
GTAGAAAACATCCTTGCGTATCACTCAACTGTGTGTGGGCCGTTAGCACAATGTTTTTAA
TAATTATTGTGTTCTGTGTTGGGGTTATAAAATATATTCAACTCTCTGAAGAAATGGAAC
AAATGAAAAAAGATTTTGTGTCTTTGCAATTGGAATTGGACACAGTACGCAACCCTGATG
CATTAGAAATGGGTGATCATTCAAAACTTGTTGGTGACAAGACACCAGGGGCATCTGTAC
CTAATGGAAATTCTGATGTATTTGTAACACCTAGAGAAAGACGCGGTGTAACAGTTTCAC
CACGTAACAACCGTGCGGATTTGACACATAATTCAGGTTTGCATGGTATTGCTGGCAGGG
ATGGGCGAGATGGAAGAGATGGTGCCAGAGGTCAACAGGGTCCACCTGGCCCACTAGGCC
CTCCTGGCCCAAGTGGTGCTTCAGTGCGTGGTCCATCGGGCCCCAGAGGACCACCGGGTT
TTATTGGACCTGAAGGAAGACCCGGACCTCCTGGTTTACCTGGAAAAGATCTCACTTCCT
CAGTTTTGCATTTAGAAGGAGATCGATCGCCATCTGTACTTAGTGGAAGTGATGGAGTTC
TTAACCATTGGATTAAAAGTCAATGGAGTTCAGATGTTACATTCCGTTATTTTCAACATA
ATGGATCCATCCAAGTTCAATCACCTGGTACTTACTACATTTATAGTCAGTTACTCACAG
TTGATTCTTCAACTGATATTCTGAGCCATGAAGTGAAAATCAATGGAAATACTTTTCTGC
GATGTGAGCGTATATCCCAACGTAGCACATGCTTTACTTCGGGTGTTCGAAGAATGAATA
AATATGACAATGTGTATTTGTCCACTAAGTATCCACAAACAACAGTTGATATGACACCGG
ATGTTTCGTTCTTTGGAATGGTTCAGTGGTCATCACACGATGAGCTGTGATTGGGTAAAA
CATCAGTGAACCCTACCAGTGATGGACACAAATATTTTCTACTGACTGTATTGTATTTTA
AACACACTGCGGAAAATACCCAAGAGTTTATAACTCAAACTGTGCTTTTCTAACATCGTT
TTTATAAAATGTGAGATTTTTTACAGTTTTATATTCTGCAGTTTTTGTTGGGCTTTAGGT
TTAACTTCCATTGAGATAGAGAACGCTGGTAGTTTATCTCATTATCTGTAGAAATTCAAA
TAACCAAGGACAGTATTGTTACTACCCTCACACAGATAAATGTATTATATTTTATCTTCA
TAGTTCCTTATATGCTTGGACGAACGTACTATTAGATTGAGCGTTGCAGTCATACTTTTG
TAATATTTTAGCCACTGTGACTTAAAAAAGTCAGCCAAATCATTTTTACTGCCGCTGTGT
CAATTGACCAACAATCATTTAAATTAACTCTGTATCGTTTTACTGTTGATTTTTATAATC
TATCTCTACTGCCAAAACATGTGAAATTAATTTTAAAAAATTGCTATAACTGCCATGTAT
CTGTTTTATTTAGATATTTTAAATTTCCATGTGTTTAAATTAACCTGCTTCTTCTGAACT
CACTACCCCCTAAAATTAATTTGTTAGTTTATTCAATATTCCTTTTTTTGTATTTCTGAA
ATACTGTTATAACCAAACACTAAACAAAGAAATCAATTGCTGTTTATTGTTTTAATTGTG
CCTTGTTACAACATCATTTAATTATCGTTTGTTCCATAACTTTGTACAAATTAAAATGTT
TAGATCATCA
| Pfam |
Collagen (IPR008160) - T[178-231] 8.0E-7 |
| Gene3D |
Tumour_necrosis_fac-like_dom (IPR008983) - T[237-368] 1.4E-24 |
| ProSiteProfiles |
TNF_dom (IPR006052) - T[241-298] 10.188 |
| SUPERFAMILY |
Tumour_necrosis_fac-like_dom (IPR008983) - T[261-372] 3.48E-20 |
| Pfam |
TNF_dom (IPR006052) - T[263-367] 2.1E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|