- Transcript 'KH2012:KH.S215.4.v1....' >
- Region 'REG00001182' >
- Region 'REG00000688' >
- Transcript 'KH2012:KH.S598.3.v1....'
Transcript Model
Transcript Id
KH2012:KH.S598.3.v1.A.nonSL3-1
Possible name(s)
ADIPOQ; C1QTNF7; EDA
Gene model
Location
KhS598 [19,577 / 26,515]
Amino acid sequence
Length: 398
>KH.S598.3.v1.A.nonSL3-1
ILNVCLKLFVRWFRCYGQSSEQGIWCTMDERGDISRNSISLNECPGIAENRDDEIQSIYI
SPSIRDIHSYRCSKSTAAQKNYGRKHPCVSLNCVWAVSTMFLIIIVFCVGVIKYIQLSEE
MEQMKKDFVSLQLELDTVRNPDALEMGDHSKLVGDKTPGASVPNGNSDVFVTPRERRGVT
VSPRNNRADLTHNSGLHGIAGRDGRDGRDGARGQQGPPGPLGPPGPSGASVRGPSGPRGP
PGFIGPEGRPGPPGLPGKDLTSSVLHLEGDRSPSVLSGSDGVLNHWIKSQWSSDVTFRYF
QHNGSIQVQSPGTYYIYSQLLTVDSSTDILSHEVKINGNTFLRCERISQRSTCFTSGVRR
MNKYDNVYLSTKYPQTTVDMTPDVSFFGMVQWSSHDEL
Nucleotide sequence
Length: 1,997
>KH2012:KH.S598.3.v1.A.nonSL3-1
ATATTAAATGTTTGTTTAAAGCTGTTTGTCAGGTGGTTTCGGTGTTATGGACAGAGCAGC
GAGCAAGGAATCTGGTGTACCATGGATGAAAGAGGTGATATATCACGCAATAGCATTTCC
CTGAATGAGTGCCCTGGAATAGCTGAGAACAGAGATGATGAAATACAAAGCATTTACATT
TCACCATCCATTAGAGATATTCATAGTTATCGATGCTCAAAATCCACTGCTGCTCAAAAA
AACTATGGTAGAAAACATCCTTGCGTATCACTCAACTGTGTGTGGGCCGTTAGCACAATG
TTTTTAATAATTATTGTGTTCTGTGTTGGGGTTATAAAATATATTCAACTCTCTGAAGAA
ATGGAACAAATGAAAAAAGATTTTGTGTCTTTGCAATTGGAATTGGACACAGTACGCAAC
CCTGATGCATTAGAAATGGGTGATCATTCAAAACTTGTTGGTGACAAGACACCAGGGGCA
TCTGTACCTAATGGAAATTCTGATGTATTTGTAACACCTAGAGAAAGACGCGGTGTAACA
GTTTCACCACGTAACAACCGTGCGGATTTGACACATAATTCAGGTTTGCATGGTATTGCT
GGCAGGGATGGGCGAGATGGAAGAGATGGTGCCAGAGGTCAACAGGGTCCACCTGGCCCA
CTAGGCCCTCCTGGCCCAAGTGGTGCTTCAGTGCGTGGTCCATCGGGCCCCAGAGGACCA
CCGGGTTTTATTGGACCTGAAGGAAGACCCGGACCTCCTGGTTTACCTGGAAAAGATCTC
ACTTCCTCAGTTTTGCATTTAGAAGGAGATCGATCGCCATCTGTACTTAGTGGAAGTGAT
GGAGTTCTTAACCATTGGATTAAAAGTCAATGGAGTTCAGATGTTACATTCCGTTATTTT
CAACATAATGGATCCATCCAAGTTCAATCACCTGGTACTTACTACATTTATAGTCAGTTA
CTCACAGTTGATTCTTCAACTGATATTCTGAGCCATGAAGTGAAAATCAATGGAAATACT
TTTCTGCGATGTGAGCGTATATCCCAACGTAGCACATGCTTTACTTCGGGTGTTCGAAGA
ATGAATAAATATGACAATGTGTATTTGTCCACTAAGTATCCACAAACAACAGTTGATATG
ACACCGGATGTTTCGTTCTTTGGAATGGTTCAGTGGTCATCACACGATGAGCTGTGATTG
GGTAAAACATCAGTGAACCCTACCAGTGATGGACACAAATATTTTCTACTGACTGTATTG
TATTTTAAACACACTGCGGAAAATACCCAAGAGTTTATAACTCAAACTGTGCTTTTCTAA
CATCGTTTTTATAAAATGTGAGATTTTTTACAGTTTTATATTCTGCAGTTTTTGTTGGGC
TTTAGGTTTAACTTCCATTGAGATAGAGAACGCTGGTAGTTTATCTCATTATCTGTAGAA
ATTCAAATAACCAAGGACAGTATTGTTACTACCCTCACACAGATAAATGTATTATATTTT
ATCTTCATAGTTCCTTATATGCTTGGACGAACGTACTATTAGATTGAGCGTTGCAGTCAT
ACTTTTGTAATATTTTAGCCACTGTGACTTAAAAAAGTCAGCCAAATCATTTTTACTGCC
GCTGTGTCAATTGACCAACAATCATTTAAATTAACTCTGTATCGTTTTACTGTTGATTTT
TATAATCTATCTCTACTGCCAAAACATGTGAAATTAATTTTAAAAAATTGCTATAACTGC
CATGTATCTGTTTTATTTAGATATTTTAAATTTCCATGTGTTTAAATTAACCTGCTTCTT
CTGAACTCACTACCCCCTAAAATTAATTTGTTAGTTTATTCAATATTCCTTTTTTTGTAT
TTCTGAAATACTGTTATAACCAAACACTAAACAAAGAAATCAATTGCTGTTTATTGTTTT
AATTGTGCCTTGTTACAACATCATTTAATTATCGTTTGTTCCATAACTTTGTACAAATTA
AAATGTTTAGATCATCA
| Pfam |
Collagen (IPR008160) - T[201-254] 8.4E-7 |
| Gene3D |
Tumour_necrosis_fac-like_dom (IPR008983) - T[260-391] 1.6E-24 |
| ProSiteProfiles |
TNF_dom (IPR006052) - T[264-321] 10.188 |
| SUPERFAMILY |
Tumour_necrosis_fac-like_dom (IPR008983) - T[284-395] 3.98E-20 |
| Pfam |
TNF_dom (IPR006052) - T[286-390] 2.3E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|