- Transcript 'Moocci.CG.ELv1_2.S61...' >
- Clone 'cijm006c18' >
- Clone 'cicl061n20' >
- Transcript 'KH2012:KH.S598.3.v1....'
Transcript Model
Transcript Id
KH2012:KH.S598.3.v1.A.ND1-1
Possible name(s)
ADIPOQ; C1QTNF7; EDA
Gene model
Location
KhS598 [19,577 / 26,679]
Amino acid sequence
Length: 410
>KH.S598.3.v1.A.ND1-1
NRQKCIVEVIANILNVCLKLFVRWFRCYGQSSEQGIWCTMDERGDISRNSISLNECPGIA
ENRDDEIQSIYISPSIRDIHSYRCSKSTAAQKNYGRKHPCVSLNCVWAVSTMFLIIIVFC
VGVIKYIQLSEEMEQMKKDFVSLQLELDTVRNPDALEMGDHSKLVGDKTPGASVPNGNSD
VFVTPRERRGVTVSPRNNRADLTHNSGLHGIAGRDGRDGRDGARGQQGPPGPLGPPGPSG
ASVRGPSGPRGPPGFIGPEGRPGPPGLPGKDLTSSVLHLEGDRSPSVLSGSDGVLNHWIK
SQWSSDVTFRYFQHNGSIQVQSPGTYYIYSQLLTVDSSTDILSHEVKINGNTFLRCERIS
QRSTCFTSGVRRMNKYDNVYLSTKYPQTTVDMTPDVSFFGMVQWSSHDEL
Nucleotide sequence
Length: 2,161
>KH2012:KH.S598.3.v1.A.ND1-1
GTAAACATCTCGCGCGAAAATTAAGAAGTTTACGGTCCTTGGAAATTTAATAGGCGTGAT
GTTTGTTGGTTCTGCAGCGGCTAATCTAGGCAACCACACTGTATCCAGTTCAGTGTTGTA
ACATGTAGAACAGACAAAAGTGCATTGTGGAAGTAATTGCGAATATATTAAATGTTTGTT
TAAAGCTGTTTGTCAGGTGGTTTCGGTGTTATGGACAGAGCAGCGAGCAAGGAATCTGGT
GTACCATGGATGAAAGAGGTGATATATCACGCAATAGCATTTCCCTGAATGAGTGCCCTG
GAATAGCTGAGAACAGAGATGATGAAATACAAAGCATTTACATTTCACCATCCATTAGAG
ATATTCATAGTTATCGATGCTCAAAATCCACTGCTGCTCAAAAAAACTATGGTAGAAAAC
ATCCTTGCGTATCACTCAACTGTGTGTGGGCCGTTAGCACAATGTTTTTAATAATTATTG
TGTTCTGTGTTGGGGTTATAAAATATATTCAACTCTCTGAAGAAATGGAACAAATGAAAA
AAGATTTTGTGTCTTTGCAATTGGAATTGGACACAGTACGCAACCCTGATGCATTAGAAA
TGGGTGATCATTCAAAACTTGTTGGTGACAAGACACCAGGGGCATCTGTACCTAATGGAA
ATTCTGATGTATTTGTAACACCTAGAGAAAGACGCGGTGTAACAGTTTCACCACGTAACA
ACCGTGCGGATTTGACACATAATTCAGGTTTGCATGGTATTGCTGGCAGGGATGGGCGAG
ATGGAAGAGATGGTGCCAGAGGTCAACAGGGTCCACCTGGCCCACTAGGCCCTCCTGGCC
CAAGTGGTGCTTCAGTGCGTGGTCCATCGGGCCCCAGAGGACCACCGGGTTTTATTGGAC
CTGAAGGAAGACCCGGACCTCCTGGTTTACCTGGAAAAGATCTCACTTCCTCAGTTTTGC
ATTTAGAAGGAGATCGATCGCCATCTGTACTTAGTGGAAGTGATGGAGTTCTTAACCATT
GGATTAAAAGTCAATGGAGTTCAGATGTTACATTCCGTTATTTTCAACATAATGGATCCA
TCCAAGTTCAATCACCTGGTACTTACTACATTTATAGTCAGTTACTCACAGTTGATTCTT
CAACTGATATTCTGAGCCATGAAGTGAAAATCAATGGAAATACTTTTCTGCGATGTGAGC
GTATATCCCAACGTAGCACATGCTTTACTTCGGGTGTTCGAAGAATGAATAAATATGACA
ATGTGTATTTGTCCACTAAGTATCCACAAACAACAGTTGATATGACACCGGATGTTTCGT
TCTTTGGAATGGTTCAGTGGTCATCACACGATGAGCTGTGATTGGGTAAAACATCAGTGA
ACCCTACCAGTGATGGACACAAATATTTTCTACTGACTGTATTGTATTTTAAACACACTG
CGGAAAATACCCAAGAGTTTATAACTCAAACTGTGCTTTTCTAACATCGTTTTTATAAAA
TGTGAGATTTTTTACAGTTTTATATTCTGCAGTTTTTGTTGGGCTTTAGGTTTAACTTCC
ATTGAGATAGAGAACGCTGGTAGTTTATCTCATTATCTGTAGAAATTCAAATAACCAAGG
ACAGTATTGTTACTACCCTCACACAGATAAATGTATTATATTTTATCTTCATAGTTCCTT
ATATGCTTGGACGAACGTACTATTAGATTGAGCGTTGCAGTCATACTTTTGTAATATTTT
AGCCACTGTGACTTAAAAAAGTCAGCCAAATCATTTTTACTGCCGCTGTGTCAATTGACC
AACAATCATTTAAATTAACTCTGTATCGTTTTACTGTTGATTTTTATAATCTATCTCTAC
TGCCAAAACATGTGAAATTAATTTTAAAAAATTGCTATAACTGCCATGTATCTGTTTTAT
TTAGATATTTTAAATTTCCATGTGTTTAAATTAACCTGCTTCTTCTGAACTCACTACCCC
CTAAAATTAATTTGTTAGTTTATTCAATATTCCTTTTTTTGTATTTCTGAAATACTGTTA
TAACCAAACACTAAACAAAGAAATCAATTGCTGTTTATTGTTTTAATTGTGCCTTGTTAC
AACATCATTTAATTATCGTTTGTTCCATAACTTTGTACAAATTAAAATGTTTAGATCATC
A
| Pfam |
Collagen (IPR008160) - T[213-266] 9.6E-7 |
| Gene3D |
Tumour_necrosis_fac-like_dom (IPR008983) - T[272-403] 1.7E-24 |
| ProSiteProfiles |
TNF_dom (IPR006052) - T[276-333] 10.188 |
| SUPERFAMILY |
Tumour_necrosis_fac-like_dom (IPR008983) - T[296-407] 4.15E-20 |
| Pfam |
TNF_dom (IPR006052) - T[298-402] 2.4E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|