- Transcript 'KH2012:KH.C12.191.v4...' >
- Transcript 'KH2012:KH.C2.101.v2....' >
- Region 'REG00000840' >
- Transcript 'Phfumi.CG.MTP2014.S8...' >
- Transcript 'KH2012:KH.S589.4.v2....'
Transcript Model
Transcript Id
KH2012:KH.S589.4.v2.A.ND2-2
Possible name(s)
TBX15; TBX18; TBX22
Gene model
Location
KhS589 [13,065 / 20,894]
Amino acid sequence
Length: 728
>KH.S589.4.v2.A.ND2-2
EHRRFNDQKFQSNHHSCGITCYVMFSSLEHVESASFDPCTSGSSGNLRRISDSPLHLQDA
AELSDLGNFRSVSDSISETSRSSENFDESLQNHPTHDDEISFLPWENINPEVFRNDQIEI
SEPDPNNAVYDATNFDNGHCSTQFDTLIRHNSDCYVSTRELSPNNEFNNEVLGCDNDVIN
DGRFDDWKSGIQVNEWNEPRDDSNIASAPLPLAQDPHPPIIDLTHSPRNHSTDRTEAPQS
SIPSSYHLLSLMNGFSCSQPPNYPPIPTNHQPHFLPFNQPINHPGINQNTAPQQDLENFY
IHNQPNQHHTSHNNHYIQDNETKWPPNIAHKSDQISIDLVNKELWRKFHEIGTEMIITKA
GRRMFPSIKLNFKGLDPTSMYILAIDILPVDNNRYRYVYHSSQWMAAGTTEASTPPRTYV
HPDSPASGDVWMKQPITFDKLKLTNNEQNNKGHLILHSMHKYQPRIHLISCGKFPKYDVI
SYVPAVGRIDDVIRDDVMTFVFPECAFTTVTAYQNQQITQLKIDRNPFAKGFRDSNKSWK
PRSSSNNERQTATKRQWRVKTTSQSPVMTSNTTDHIVSPIHPMINTSSHPPIKRNKLHLE
QAFNEPDFVFPSISPDYCVTNLDNDVTCSELPYQRNPDDVIKPSDSGYDACLTSQSFLRP
FDVNAFNPLQGDLPQTENAASFIDDFELELSTNGTNSDVKHNESEYYVISTSHSENDVTA
NLTSNNLE
Nucleotide sequence
Length: 2,260
>KH2012:KH.S589.4.v2.A.ND2-2
GAGCATCGTCGCTTCAACGACCAGAAGTTCCAAAGCAATCACCATAGCTGCGGTATTACT
TGTTACGTCATGTTTTCGTCATTGGAGCACGTTGAGTCAGCCTCCTTCGATCCTTGCACT
TCGGGTTCTTCCGGAAATCTTCGGAGAATTTCGGATTCCCCGCTTCATCTTCAGGATGCT
GCAGAACTATCCGACTTAGGGAATTTTCGGAGCGTTTCGGATTCGATCTCCGAAACTTCT
CGTTCGTCGGAAAACTTTGATGAGTCACTACAAAACCACCCGACTCACGATGACGAAATA
TCTTTTCTACCGTGGGAAAATATAAACCCGGAAGTATTTCGAAACGACCAAATCGAAATA
AGCGAGCCTGATCCTAATAATGCTGTTTATGACGCAACAAACTTTGACAATGGCCACTGT
TCCACTCAATTCGACACCCTTATACGTCACAACAGCGATTGTTACGTGTCAACGCGTGAA
TTATCACCAAACAATGAATTCAACAATGAGGTTTTGGGATGTGATAATGACGTCATAAAC
GATGGACGCTTCGATGATTGGAAATCTGGAATTCAAGTGAACGAATGGAACGAACCGCGA
GATGACTCAAACATTGCTTCTGCCCCACTTCCGCTCGCCCAAGATCCTCACCCACCAATC
ATAGACCTTACTCACTCCCCACGTAACCACAGCACTGACCGCACGGAGGCGCCACAGAGC
AGCATTCCCAGCAGCTACCACCTTTTATCATTGATGAATGGATTTTCATGCAGCCAACCC
CCAAACTACCCACCTATCCCAACAAACCACCAACCACACTTTCTACCGTTCAATCAACCA
ATCAACCACCCCGGTATTAACCAAAACACTGCGCCACAACAAGACCTAGAAAACTTTTAC
ATCCACAACCAACCTAACCAACACCATACGAGTCATAACAACCATTATATTCAAGATAAC
GAAACAAAATGGCCGCCAAATATAGCACACAAATCGGATCAAATCTCAATCGATCTCGTA
AATAAAGAACTTTGGCGAAAATTCCACGAAATTGGGACCGAGATGATCATTACCAAGGCT
GGCAGACGAATGTTCCCATCCATCAAACTGAACTTTAAAGGGTTGGACCCAACGTCTATG
TACATCCTAGCTATTGATATATTGCCAGTAGATAACAACAGATACAGGTACGTCTACCAT
AGCTCCCAATGGATGGCAGCAGGCACCACAGAAGCAAGCACCCCACCTCGAACTTACGTG
CATCCTGATTCGCCAGCGTCTGGTGACGTATGGATGAAACAGCCAATCACATTCGACAAA
TTAAAACTGACCAATAACGAACAGAACAACAAGGGTCACTTGATCCTGCACTCGATGCAT
AAATACCAACCTCGTATTCATCTCATATCGTGCGGCAAATTCCCCAAGTATGACGTCATC
AGTTACGTACCCGCCGTCGGGAGGATCGATGACGTCATTCGTGATGACGTCATGACGTTT
GTGTTTCCCGAATGCGCCTTCACGACCGTGACAGCTTACCAGAACCAACAGATCACACAA
CTTAAAATTGACAGGAACCCTTTCGCTAAAGGTTTCAGAGACAGCAACAAATCTTGGAAA
CCTCGAAGCAGCAGCAATAATGAAAGACAAACGGCCACAAAACGGCAGTGGAGAGTTAAA
ACTACGTCACAATCACCTGTGATGACGTCAAACACAACTGATCATATAGTTTCCCCAATC
CACCCGATGATCAACACGTCATCCCACCCTCCTATAAAGAGGAACAAACTTCATTTAGAG
CAAGCATTCAACGAACCGGACTTTGTCTTTCCTTCCATCTCGCCCGATTATTGCGTCACA
AATCTTGACAATGACGTCACATGCAGTGAACTCCCTTACCAGAGAAATCCCGATGACGTC
ATTAAACCTTCGGATTCCGGCTATGACGCATGTCTGACGTCACAATCGTTTTTGAGGCCG
TTCGATGTAAACGCTTTTAACCCGTTACAGGGGGATTTACCCCAAACTGAGAATGCAGCT
TCGTTTATTGACGATTTTGAGTTGGAACTCAGTACTAACGGAACAAATAGTGACGTCAAG
CATAACGAAAGCGAGTATTACGTCATTTCAACGTCACATTCCGAAAATGACGTCACGGCA
AACCTGACGTCAAATAATTTAGAATAACCGAAGTTTCTATTTTCCGCTTTGTTTCCATGC
ACATTTTTATTTTAAATATGAGAATACAAACTGTCTCAAC
| PANTHER |
TF_T-box (IPR001699) - T[300-573] 1.5E-105 |
| Gene3D |
T-box_sf (IPR036960) - T[322-534] 5.0E-87 |
| CDD |
TF_T-box (IPR001699) - T[334-538] 2.33136E-113 |
| SMART |
TF_T-box (IPR001699) - T[334-539] 1.0E-105 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[334-534] 1.37E-71 |
| Pfam |
TF_T-box (IPR001699) - T[338-534] 1.5E-75 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[339-534] 73.498 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[344-363] . - T[420-438] . |
| PRINTS |
TF_T-box (IPR001699) - T[352-376] 6.8E-29 - T[419-432] 6.8E-29 - T[436-445] 6.8E-29 - T[455-469] 6.8E-29 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX18_HUMAN | 63.054 % | 281 | 2.04E-85 |
| TBX15_HUMAN | 58.962 % | 274 | 8.22E-83 |
| TBX22_HUMAN | 60.294 % | 263 | 1.09E-79 |