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  1. Transcript 'KH2012:KH.S588.1.v1....'

Transcript Model

Transcript Id

KH2012:KH.S588.1.v1.A.ND1-1

Possible name(s)

CLEC4F

Gene model

KH2012:KH.S588.1

Location

KhS588 [18,886 / 20,611]

Sequences

Amino acid sequence

Length: 378

>KH.S588.1.v1.A.ND1-1
MRVVRLVWFVVVWLFVSQTTDASFNSHRSNNGTFLYTCGGTTHYFSDAVELCEQANAQLA
VINTEEMFNGALQVFGKCFKAYFWIGLGRNESTGNEYRWLDGSRFDSGKVGGRTIKYNDT
KGCVGGALQRPNILTATVCNGLYHVLCFTTQNISTITTTTKAETTVAATTYNPTSTKPIT
DSQTSTQLTSESGGRTSTHATTNERTAALPTSAPIETWLIIVIAVGGILFLVFLVGIIYC
CCCRKRKDIKTSVEIEDNQAGNYQTIEHLSENVYEIAEMDAPPPPPLPPALADEPALSDY
VSMRSLSQRDPATGDGYGTIDQSVADPEAYSTLYDETPTDDSPVNKDDESYGGNRSMYAS
VNKSPIKESTYTVDRTSW

Nucleotide sequence

Length: 1,488

>KH2012:KH.S588.1.v1.A.ND1-1
ATGAGAGTAGTTAGGTTGGTGTGGTTCGTGGTGGTTTGGTTGTTTGTATCGCAAACAACA
GATGCGAGTTTCAACAGTCACCGCTCCAATAATGGGACGTTCTTATATACTTGTGGAGGT
ACTACCCATTATTTTTCTGATGCTGTTGAATTATGCGAGCAAGCGAACGCACAACTGGCT
GTAATTAACACGGAGGAAATGTTTAACGGCGCTCTGCAAGTTTTTGGCAAGTGTTTCAAA
GCATATTTCTGGATCGGTTTAGGCAGAAATGAAAGTACTGGTAACGAATATCGGTGGTTG
GATGGTTCTCGGTTTGATTCTGGAAAAGTTGGTGGGAGAACAATTAAATATAATGATACT
AAAGGTTGTGTGGGAGGTGCGTTACAGAGGCCAAATATTTTAACAGCCACAGTGTGTAAT
GGCCTGTACCACGTTCTTTGTTTCACCACACAAAACATATCAACAATAACGACAACAACA
AAAGCCGAAACCACAGTCGCAGCTACAACGTATAACCCAACAAGCACAAAACCAATAACT
GATAGTCAAACAAGCACACAACTAACATCAGAATCTGGTGGCCGGACAAGCACACATGCT
ACCACAAATGAACGAACAGCTGCACTACCAACCAGTGCACCGATAGAGACATGGCTGATT
ATTGTGATAGCTGTCGGGGGGATTTTATTCTTGGTATTTCTGGTTGGAATTATCTACTGC
TGTTGCTGCAGAAAGCGAAAAGATATAAAGACATCAGTTGAAATTGAAGACAACCAAGCT
GGAAATTATCAGACTATTGAACACCTGTCTGAGAACGTTTACGAAATCGCTGAAATGGAT
GCTCCCCCGCCGCCACCCCTACCGCCAGCTTTAGCAGACGAACCTGCTTTATCGGACTAT
GTCTCAATGCGAAGTTTAAGTCAGCGCGACCCAGCTACTGGGGACGGATATGGTACAATA
GATCAATCAGTGGCTGACCCAGAAGCATACTCAACACTTTATGACGAAACACCAACCGAT
GATTCACCCGTAAACAAAGACGACGAGAGCTACGGAGGAAATAGATCTATGTACGCTAGT
GTAAACAAATCTCCAATCAAAGAATCAACATATACAGTAGATAGAACCAGTTGGTGACGT
GACATGTAGCTTTATGACGTAACAGCAAAATTCTTGAACAAAATGTTTGTTTGAACATAA
TGATCATTGTTACGAAACAATACGCCCGGTTTCGTTGTGGTTTAATGCGTTTTCTCATAT
TTGTTTATAGTTTGAAAGGTTTATAATACGCAGCGGTTAAACTTAAATGTCCAAAAAGTA
GTTCCCAAGACTTGGGGTAGCTCTAGTGTTTAAACCTGTGCCACAGTTTAGTTAAAATAT
TGAAGAAAACTTGATGTTTCTTGTTTTAACGCCCGTTGAAATACGACCGAATTAAACAGA
TTTTTCTTAAACTGCAAACTTCCCTTTCAATGTGCAGTTGAAACTAAA

InterProScan

Gene3D
C-type_lectin-like/link_sf (IPR016186) - T[17-161] 2.7E-10
SUPERFAMILY
CTDL_fold (IPR016187) - T[31-152] 1.39E-11
ProSiteProfiles
C-type_lectin-like (IPR001304) - T[38-148] 9.306
Pfam
C-type_lectin-like (IPR001304) - T[43-147] 2.0E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value