Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Phfumi.CG.MTP2014.S1...' > 
  3. Transcript 'Haaura.CG.MTP2014.S3...' > 
  4. Transcript 'KH2012:KH.S423.2.v2....'

Transcript Model

Transcript Id

KH2012:KH.S423.2.v2.R.ND4-1

Possible name(s)

FIBCD1; TNR; TNXB

Gene model

KH2012:KH.S423.2

Location

KhS423 [48,740 / 51,624]

Sequences

Amino acid sequence

Length: 214

>KH.S423.2.v2.R.ND4-1
ITPPQNCQDILNLGYTNNGIYKIFSNGETMKVYCDLTTDNGGWIVIQRRQDGLVDFYRNW
ADYKFGFGEMSSDFWIGLHNMHLLTREQNYELRIDMKDCNDVNKYATYGSFRVGGESALF
KLQIEDYNGTAGDGLSVNNGAYFSTKDRDNDKFHLHCATHRTTGWWYRGNCGDANLNGPY
SPCEWYEDSVASYYPFQDEFYGLKFIEMKIRPAL

Nucleotide sequence

Length: 1,095

>KH2012:KH.S423.2.v2.R.ND4-1
AAATAACCCCTCCACAAAATTGCCAAGATATTTTGAACCTTGGATACACAAACAATGGAA
TATATAAGATCTTTAGTAATGGAGAAACAATGAAGGTGTACTGTGACCTCACAACTGACA
ATGGTGGATGGATTGTCATCCAAAGAAGACAAGATGGCTTGGTTGACTTTTACAGAAACT
GGGCAGATTATAAGTTTGGGTTTGGGGAAATGTCATCAGATTTCTGGATTGGTCTCCATA
ACATGCACCTCTTAACCCGTGAGCAAAACTATGAGCTGCGTATTGATATGAAAGATTGTA
ATGATGTCAACAAATATGCTACATATGGGTCATTCCGAGTGGGAGGTGAGTCAGCACTTT
TTAAACTTCAAATTGAAGATTATAACGGAACAGCAGGCGATGGATTATCTGTAAACAATG
GTGCTTATTTCTCAACAAAGGACAGAGATAATGATAAATTCCATCTTCATTGCGCAACCC
ACAGAACTACTGGATGGTGGTACCGTGGCAACTGTGGTGACGCCAATTTAAACGGCCCGT
ACTCCCCATGTGAATGGTACGAAGATTCCGTGGCGAGTTATTATCCATTCCAAGATGAAT
TCTATGGTCTTAAGTTTATTGAGATGAAAATCAGACCAGCACTATAGAGATCTTATAACT
GTTGCTATAGTGACCAAGCCATAAAGATCTTATATCGTGTGAAATAAAGTAGGAATATAT
AGGATCTTTATAAACCTATGTAAAGATCTTATATATGTTGCTATAGAAACCAAGACCGTA
AAGATCTTATAACACCTTCTTAAAATAAGTAACTATTTCTATAGATATCTTATAAAATTT
ATAAGATCTTTATCATGTAAAATAAATTAATTTTAAACTTTGGTAAGTATTAAGTTTATT
GTAATTCGCATTATTATAACTTGTATAAAATTTTATAAATCAATGTATCAATAAAATATA
AATTACAAAACTTTATTTGCTACTTGACTCCAGCTTTCAAATGAATGTAACTTGTTATCT
TCGCAGGGCAGTGACAGTCATTATAAAACCGGGTATTCTGTTTCATACACCTCGTTCCCA
CTTACTAGTTACCAC

InterProScan

ProSiteProfiles
Fibrinogen_a/b/g_C_dom (IPR002181) - T[1-214] 51.519
SMART
Fibrinogen_a/b/g_C_dom (IPR002181) - T[2-213] 9.6E-80
SUPERFAMILY
Fibrinogen-like_C (IPR036056) - T[2-212] 1.7E-74
CDD
Fibrinogen_a/b/g_C_dom (IPR002181) - T[3-212] 9.74043E-90
Pfam
Fibrinogen_a/b/g_C_dom (IPR002181) - T[4-212] 2.4E-63

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TENR_HUMAN 47.17 % 207 5.98E-62
TENX_HUMAN 39.151 % 175 1.42E-50
FBCD1_HUMAN 43.636 % 174 2.36E-52