Aniseed - Transcript Card

Transcript 'KH2012:KH.C4.515.v1....' >
Transcript 'KH2012:KH.S388.3.v1....'

Transcript Model

Transcript Id

KH2012:KH.S388.3.v1.B.ND1-1

Possible name(s)

ATL1; ATL2; ATL3

Gene model

KH2012:KH.S388.3

Location

KhS388 [63,130 / 65,527]

Sequences

Amino acid sequence

Length: 405

>KH.S388.3.v1.B.ND1-1
SMSGQLPLVGSEAEIKAVPILDMQKDGQGFEPIFEVFGEIFDKVRDFPVAIISIAGPFRK
GKSFLLNLLAHYLMENQVRLLRSSTWFKMGDTHPARVFEWKGGVERNTVGIHITNKPFML
ETSDNKKVAVFLMDTQGMFDTKTTAKDCSTIFALSTLLSSVQIYNLTEQIHENDLQQFEI
FTKYAKYAAEEKQHVNSSTTPFQSLMLLIRNWEKADFKSSFKGGAKYLETVMKPNIQENK
SVRQNIRTSFSEVACFPMEHPGKKVAKRKESDDSGVPLKDMDDDFLQQVDEVARYLFSPD
RLVIKRLNGKVVTGEQFIDLAIEYSKILSSGKMPKVEALHLEQLQSEHLAAALKKYDENV
GEVFDDDENKTNREKMEDVFRLAHLRISEKNNKHKVGSVDASLQI

Nucleotide sequence

Length: 1,225

>KH2012:KH.S388.3.v1.B.ND1-1
ACTAAAGTATGTCAGGACAATTGCCGTTGGTTGGTTCCGAAGCAGAGATAAAGGCGGTGC
CTATATTGGATATGCAGAAAGATGGACAAGGGTTTGAACCGATATTTGAGGTCTTTGGAG
AAATCTTTGATAAGGTTCGAGATTTTCCTGTCGCGATAATCAGCATAGCTGGGCCGTTTC
GGAAAGGAAAGTCATTCCTACTGAACCTGCTCGCACATTACTTGATGGAGAACCAGGTAC
GCTTACTTCGCTCATCAACCTGGTTTAAAATGGGTGACACACATCCAGCAAGAGTTTTTG
AATGGAAAGGAGGCGTTGAACGAAATACGGTTGGAATTCACATCACAAACAAACCTTTTA
TGTTGGAAACAAGCGACAATAAGAAAGTGGCGGTGTTTTTGATGGATACTCAAGGAATGT
TTGATACGAAAACAACAGCCAAAGATTGTTCGACGATATTTGCTTTGAGTACTTTACTAA
GTTCTGTACAAATCTATAACTTGACAGAACAAATTCATGAGAACGACCTTCAACAGTTTG
AGATTTTCACGAAATACGCAAAGTATGCTGCGGAAGAGAAGCAACACGTTAATTCATCAA
CTACACCGTTTCAGAGTCTCATGCTGCTTATCAGAAACTGGGAAAAGGCAGATTTTAAAA
GCAGTTTCAAGGGTGGTGCAAAATACCTTGAAACTGTTATGAAACCTAATATTCAGGAAA
ACAAATCTGTTCGCCAGAATATAAGGACATCATTTTCCGAAGTTGCTTGCTTTCCAATGG
AACACCCGGGAAAGAAAGTGGCAAAAAGGAAAGAAAGTGACGACAGTGGAGTTCCCTTGA
AAGATATGGATGACGATTTTTTACAACAAGTTGACGAAGTTGCCAGATACTTATTTAGTC
CCGATCGATTGGTGATAAAGCGATTAAACGGAAAAGTCGTAACTGGCGAACAATTCATTG
ACCTTGCTATAGAGTATTCAAAAATACTAAGCAGTGGGAAAATGCCGAAAGTGGAAGCTC
TTCATTTAGAACAATTGCAAAGCGAACATCTTGCCGCGGCTTTAAAGAAATATGACGAAA
ATGTTGGAGAAGTCTTCGACGATGATGAAAATAAAACTAACAGAGAGAAAATGGAAGATG
TTTTTCGGCTTGCACATTTGAGAATATCAGAAAAAAATAACAAACACAAGGTAGGTTCGG
TAGATGCCTCTTTACAAATTTGACT

InterProScan

SUPERFAMILY	P-loop_NTPase (IPR027417) - T[20-299] 9.69E-26
Pfam	Guanylate-bd_N (IPR015894) - T[43-303] 1.5E-58
ProSiteProfiles	G_GB1_RHD3_dom (IPR030386) - T[46-301] 56.738
SUPERFAMILY	Guanylate-bd_C_sf (IPR036543) - T[308-363] 5.36E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ATLA2_HUMAN	36.769 %	231	1.77E-70
ATLA1_HUMAN	37.363 %	228	2.72E-69
ATLA3_HUMAN	38.298 %	223	1.67E-67