- Transcript 'Phmamm.CG.MTP2014.S8...' >
- Transcript 'Cisavi.CG.ENS81.R48....' >
- Transcript 'KH2012:KH.C5.66.v5.A...' >
- Transcript 'KH2012:KH.S346.6.v1....'
Transcript Model
Transcript Id
KH2012:KH.S346.6.v1.A.ND1-1
Possible name(s)
CTGF; CYR61; WISP1
Gene model
Location
KhS346 [52,383 / 58,010]
Amino acid sequence
Length: 400
>KH.S346.6.v1.A.ND1-1
ERLQILKKLWNYFSTPDQQSVTTTTTSMPATNYVLILSFLVCMTLGVTEGQIRAFTTESP
ECRRKCNNCPPTPTCAYGVSLIPGKCGCCKQCARQLDETCNDDMKCDPHRNLYCSYSGVD
EHEGVCVAKPGRACLSSGLTYLNGESFLIGCKVKCTCMDGVLACENTCPLTITARAPKNC
RHPQLVKKPNQCCSEWICSGETLSNNNTTNTRPSSSHSQIRRRHPNTFRPRVIAMANRRT
PISITVRAKDKCNVQTTEWSACSKTCGWGVSERVTNDNKACKLRKQSRLCQIRPCSSSFV
DNIKRGKKCIRTVKAQRRVQYSFSGCQSKVYTPKYCGACTDGRCCAPKHTVTKPIKFTCD
GGFQFKKRMMVIKSCSCSRRCVGENSFFSYRRMGGDTWQE
Nucleotide sequence
Length: 2,127
>KH2012:KH.S346.6.v1.A.ND1-1
GCCTTAGCGACACAATTTATAAGAGAGACTTCAGATTTTGAAGAAACTTTGGAATTATTT
TTCGACTCCTGACCAACAGTCAGTCACAACAACTACTACAAGTATGCCAGCAACAAACTA
CGTATTGATTCTGTCTTTTCTCGTCTGCATGACTTTGGGAGTAACTGAAGGCCAAATCAG
AGCTTTTACAACTGAGTCGCCCGAATGCCGAAGAAAATGCAATAACTGCCCCCCTACCCC
CACATGTGCATATGGTGTAAGTCTCATACCAGGAAAATGCGGGTGCTGCAAGCAATGTGC
ACGTCAGTTGGACGAAACCTGCAACGATGACATGAAATGCGACCCCCACAGGAATTTATA
TTGCAGTTATTCTGGTGTTGATGAACACGAAGGCGTGTGCGTAGCCAAACCAGGTCGCGC
TTGCCTATCGAGTGGCCTCACTTATTTGAACGGCGAATCTTTCCTGATTGGTTGCAAAGT
TAAATGTACATGTATGGACGGTGTGTTGGCTTGTGAGAACACCTGCCCTCTTACCATCAC
TGCTCGTGCACCAAAGAACTGCCGACACCCACAACTTGTGAAGAAACCAAACCAGTGTTG
CTCGGAATGGATTTGCAGCGGGGAAACACTGAGTAACAATAACACAACTAACACCAGACC
TTCATCATCTCACTCACAAATTAGAAGAAGACACCCAAACACATTCAGACCAAGAGTTAT
TGCAATGGCTAACCGAAGAACTCCAATCTCCATCACCGTCCGTGCCAAGGACAAATGTAA
CGTTCAAACCACTGAATGGTCTGCCTGCTCCAAGACGTGTGGGTGGGGGGTATCTGAGCG
CGTCACTAACGATAACAAAGCTTGCAAACTACGCAAACAATCAAGACTCTGCCAGATCCG
GCCATGCAGCTCCAGCTTTGTGGACAACATTAAGCGAGGAAAGAAATGCATCCGAACTGT
GAAAGCTCAACGCCGAGTTCAATATTCATTCTCGGGATGCCAAAGCAAAGTCTACACGCC
TAAATATTGCGGGGCGTGCACAGACGGCAGATGTTGCGCACCCAAACACACGGTCACTAA
GCCAATCAAGTTCACTTGCGACGGCGGCTTCCAATTTAAGAAGAGAATGATGGTCATCAA
GTCGTGTTCATGCTCCAGGAGGTGCGTAGGTGAAAACTCGTTCTTTTCCTACCGAAGAAT
GGGCGGGGACACGTGGCAAGAGTGAAGATCACACAAGTATAACAGCTTAGGGGTTCCCCC
TTGGATAGAAGTCCTCTCCGTGAAGGTGCAATGGGACGATGACGTCATACTGCATGACGT
CACACGTTTAAACGACAACCATTGGTTGTAGAGAACTCTCCCCATCAAAGTCAACTAACT
ATCTCAGGAGCAAACATAGAAACCTTATATAACAACAGCCACACGTGATCTACTCACGAC
GAGAAAGTAGTTTTAGTGATTTATACTCCCTTTTTTTCTGTGAAACAATTGTCGATATTA
CGCTGCCATATCAATTATAACTGAACCACAAAACACGTTCAAACCTGGTTTAACCTTAAG
GCATGCACTCCCTATTACTCACGTTTTGCAGTGTTGCCTGAAAAGAAACTTAAACGCATC
TAACGAATAGGAACATATTTGATGGTAAAACCAAACTGATAACACTAATTTCACAAACAA
ATTAACCAAAGTTTCGACGTGTTTTTGTGGACAGTTATATTTGGCGACGCGTGTTTTACT
TCGCAGTTCATTTTATGGACTCTTTTAACGCTGTGACAACACCAACTTTTATAGTTTTGG
TGACACCTTGTAACTTTTTACGCTGAACGAGGAAACTCGCAGTAATATACCAGTAGTGAC
CTACACATTTTACAATGTGCTATATTAGTGTTGAAACGTAACTAAACTTTTTTGAAACTT
TTTTACAACTTTTCGACCAAACCGTAGATTTCCGTTTGTTTAAGTTTTCCGTCGATTCTT
GTTCTTGTTGTTGTTGTTACTGTCTGTCTGTTTGTCGTGCCTTGATTGTTTTATTTATAA
TTTGTACTTCACCTTTCAGATCCCATATTTTTATACCGTCACTTTTCAACGTGAATAAAA
CCAAAAGGCATTCTTGCCAAACAATAA
| ProSiteProfiles |
IGFBP-like (IPR000867) - T[54-129] 14.171 |
| SMART |
IGFBP-like (IPR000867) - T[60-128] 3.2E-4 |
| Pfam |
IGFBP-like (IPR000867) - T[62-114] 1.7E-7 |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[64-132] 2.04E-7 |
| ProSiteProfiles |
VWF_dom (IPR001007) - T[132-199] 10.362 |
| SMART |
VWF_dom (IPR001007) - T[134-198] 1.9E-8 |
| Pfam |
VWF_dom (IPR001007) - T[134-198] 2.5E-6 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[241-300] 4.4E-6 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[250-295] 3.27E-5 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[251-296] 8.491 |
| Pfam |
Glyco_hormone_CN (IPR006208) - T[307-391] 5.6E-7 |
| ProSiteProfiles |
Cys_knot_C (IPR006207) - T[309-382] 13.196 |
| SMART |
Cys_knot_C (IPR006207) - T[314-382] 3.8E-15 |
| ProSitePatterns |
Cys_knot_C (IPR006207) - T[344-381] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CTGF_HUMAN | 45.015 % | 276 | 2.22E-90 |
| WISP1_HUMAN | 35.328 % | 213 | 1.23E-65 |
| CYR61_HUMAN | 38.109 % | 212 | 4.26E-65 |