- Transcript 'Moocul.CG.ELv1_2.S11...' >
- Clone 'cien201793' >
- Transcript 'KH2012:KH.S346.10.v2...'
Transcript Model
Transcript Id
KH2012:KH.S346.10.v2.B.SL2-1
Possible name(s)
KCNQ1; KCNQ4; KCNQ5
Gene model
Location
KhS346 [14,115 / 22,913]
Amino acid sequence
Length: 573
>KH.S346.10.v2.B.SL2-1
TTCLISRQAKNPYRQSTLSAMIGPDARTLKAIKDLKETKTKHRHFQQQAYNFLERPTGVK
CFVYHVLVFMMVLICLIFSVLSTIEGQERNNVKPLLVMEAILVVVFTIEYFVRLWSAGSI
GKYRGCLGRLRFARKPICVIDLMVVSASVVILLVGRNGNVFAASAIRGIRFLQILRMLHV
DRQGGTWRLLGSVVYIHRQELITTLYIGFLALIFSSYFVYLAEKPAPESFKNGTSPTGKF
RSYADALWWGVVTVTTIGYGDHVPITWLGKVIASCFSIFAISFFALPAGILGSGFALKVQ
QKQRQKQFNRQIPAAAALIQATWRCYATSVGTNCSATWRLFKIAGNHRNSDVTNCDDVFI
EETQPRPNTTKKSRCALSRLHLDIPIFRTRPPLSKEDKSQSIPFEIGIDVDENPADGCME
QNTHVATTNTAPPGDNKYVPFIHICAIHYRMPESYKNVVRATRRLIYFLAKKRFQRSRKP
YDVRDVVEQYSQGHANVMMRIKELQRRLDLTLGKPSSFTDCQFTAGELGSNSPVNDRQRL
TAGGRLLRLEKWTETTDRKLDAIFKLLEKLNEK
Nucleotide sequence
Length: 2,000
>KH2012:KH.S346.10.v2.B.SL2-1
ATAATGCTTTAACTTGTAATGAGTGGCAGACCTAGATTCTCACGCTCCGTCGGGGACTCC
CCTACGTGGGACGCGTGGACAAGTGACGTAAGGAGAGGGAGTCCCCTAAATAGGGAAAAG
CACTTATCAGGAGTGTACAGTACCAATATACCTGAATCTAACTACAGCGTTCAAAATTCG
AGAAGAAGTTCCAAAGTGACGTCGACAGGAAAAAACACGTTTGTGGGTATAGGATTACGT
ATGTTTCAAATTAGTGCTCAACTAATTGAATTAATTAAACCACATGTTTAATTAGTCGTC
AAGCAAAGAACCCGTATCGGCAATCTACTTTATCAGCCATGATCGGACCGGACGCAAGAA
CGTTAAAAGCAATTAAAGATTTGAAAGAAACTAAAACAAAACACCGTCATTTTCAACAAC
AGGCTTATAATTTCCTTGAACGTCCAACTGGAGTCAAATGTTTCGTTTATCACGTCCTAG
TATTCATGATGGTTCTGATATGTTTGATATTCAGTGTCCTGTCAACAATCGAAGGGCAAG
AACGTAATAATGTGAAGCCATTGTTAGTCATGGAAGCAATTCTCGTCGTTGTTTTCACCA
TCGAATATTTTGTCCGCTTGTGGTCAGCAGGGAGCATTGGTAAATACAGGGGTTGCCTTG
GTCGACTTCGATTCGCCAGGAAACCAATTTGCGTCATAGACCTTATGGTGGTTAGCGCAT
CTGTTGTTATATTGCTCGTCGGGAGAAATGGGAACGTTTTCGCTGCATCTGCTATCAGAG
GCATCCGATTTCTCCAGATATTACGTATGTTACATGTTGATCGACAAGGAGGAACATGGC
GGCTGTTGGGTAGCGTCGTATACATTCACCGACAAGAGTTAATCACCACTTTATACATTG
GGTTTCTTGCTCTTATATTTTCATCGTACTTCGTATATCTGGCGGAGAAACCGGCACCAG
AATCTTTCAAGAACGGTACTTCCCCTACTGGTAAATTCCGGAGTTACGCCGATGCTTTAT
GGTGGGGTGTGGTCACAGTTACTACGATTGGCTACGGTGATCACGTGCCGATCACGTGGT
TGGGCAAAGTGATTGCGTCATGCTTCTCCATTTTCGCGATTTCTTTTTTCGCGCTTCCAG
CTGGGATTTTAGGATCCGGGTTCGCTTTAAAAGTCCAGCAGAAACAGAGACAAAAACAAT
TTAACCGACAAATACCGGCGGCTGCTGCTTTAATTCAAGCAACATGGCGTTGTTACGCAA
CTTCCGTCGGCACCAATTGTTCCGCTACGTGGAGGTTGTTCAAGATAGCTGGTAACCATC
GCAACAGTGACGTCACAAATTGTGATGACGTATTTATCGAAGAAACACAGCCAAGGCCAA
ATACAACAAAAAAATCTCGTTGCGCCCTCTCACGGTTGCATTTAGATATTCCAATATTCC
GCACGAGGCCGCCATTGAGTAAGGAAGATAAATCGCAGTCGATTCCGTTCGAAATCGGGA
TCGACGTTGATGAAAACCCCGCAGATGGGTGTATGGAACAGAACACACATGTTGCAACGA
CTAACACTGCTCCGCCAGGCGATAATAAATATGTTCCATTTATTCATATCTGTGCAATTC
ATTACAGAATGCCCGAGTCTTATAAGAACGTCGTCCGCGCAACAAGACGACTTATTTACT
TTCTTGCGAAGAAAAGGTTCCAGCGATCTCGGAAGCCATATGACGTACGTGACGTGGTGG
AACAATATTCACAAGGTCACGCAAACGTCATGATGAGAATAAAGGAGCTCCAGCGAAGGT
TGGATCTCACGTTGGGGAAACCTTCGTCGTTTACTGACTGCCAATTCACAGCAGGCGAGC
TAGGGAGTAATTCTCCAGTCAACGATCGGCAGAGGTTAACCGCTGGAGGTCGTCTTTTAC
GTCTTGAAAAATGGACTGAAACAACCGACAGAAAACTCGACGCCATTTTTAAACTTTTGG
AAAAACTCAACGAGAAATGA
| PANTHER |
VG_K_chnl (IPR028325) - T[15-565] 6.5E-235 |
| PRINTS |
VG_K_chnl (IPR028325) - T[55-83] 4.9E-21 - T[97-120] 4.9E-21 - T[171-197] 4.9E-21 - T[200-223] 4.9E-21 - T[240-262] 4.9E-21 - T[269-295] 4.9E-21 |
| Pfam |
Ion_trans_dom (IPR005821) - T[64-298] 1.2E-25 |
| PRINTS |
K_chnl_volt-dep_KCNQ (IPR003937) - T[105-124] 2.6E-24 - T[125-144] 2.6E-24 - T[187-206] 2.6E-24 |
| Pfam |
K_chnl_volt-dep_KCNQ_C (IPR013821) - T[450-567] 5.0E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KCNQ1_HUMAN | 54.766 % | 526 | 0 |
| KCNQ3_HUMAN | 38.761 % | 367 | 3.14E-117 |
| KCNQ5_HUMAN | 39.964 % | 398 | 2.15E-128 |