- Transcript 'Moocci.CG.ELv1_2.S48...' >
- Clone 'mae3h10' >
- Transcript 'KH2012:KH.S346.10.v1...'
Transcript Model
Transcript Id
KH2012:KH.S346.10.v1.B.SL1-1
Possible name(s)
KCNQ1; KCNQ4; KCNQ5
Gene model
Location
KhS346 [16,369 / 22,913]
Amino acid sequence
Length: 573
>KH.S346.10.v1.B.SL1-1
TTCLISRQAKNPYRQSTLSAMIGPDARTLKAIKDLKETKTKHRHFQQQAYNFLERPTGVK
CFVYHVLVFMMVLICLIFSVLSTIEGQERNNVKPLLVMEAILVVVFTIEYFVRLWSAGSI
GKYRGCLGRLRFARKPICVIDLMVVSASVVILLVGRNGNVFAASAIRGIRFLQILRMLHV
DRQGGTWRLLGSVVYIHRQELITTLYIGFLALIFSSYFVYLAEKPAPESFKNGTSPTGKF
RSYADALWWGVVTVTTIGYGDHVPITWLGKVIASCFSIFAISFFALPAGILGSGFALKVQ
QKQRQKQFNRQIPAAAALIQATWRCYATSVGTNCSATWRLFKIAGNHRNSDVTNCDDVFI
EETQPRPNTTKKSRCALSRLHLDIPIFRTRPPLSKEDKSQSIPFEIGIDVDENPADGCME
QNTHVATTNTAPPGDNKYVPFIHICAIHYRMPESYKNVVRATRRLIYFLAKKRFQRSRKP
YDVRDVVEQYSQGHANVMMRIKELQRRLDLTLGKPSSFTDCQFTAGELGSNSPVNDRQRL
TAGGRLLRLEKWTETTDRKLDAIFKLLEKLNEK
Nucleotide sequence
Length: 1,782
>KH2012:KH.S346.10.v1.B.SL1-1
GTTTGTGGGTATAGGATTACGTATGTTTCAAATTAGTGCTCAACTAATTGAATTAATTAA
ACCACATGTTTAATTAGTCGTCAAGCAAAGAACCCGTATCGGCAATCTACTTTATCAGCC
ATGATCGGACCGGACGCAAGAACGTTAAAAGCAATTAAAGATTTGAAAGAAACTAAAACA
AAACACCGTCATTTTCAACAACAGGCTTATAATTTCCTTGAACGTCCAACTGGAGTCAAA
TGTTTCGTTTATCACGTCCTAGTATTCATGATGGTTCTGATATGTTTGATATTCAGTGTC
CTGTCAACAATCGAAGGGCAAGAACGTAATAATGTGAAGCCATTGTTAGTCATGGAAGCA
ATTCTCGTCGTTGTTTTCACCATCGAATATTTTGTCCGCTTGTGGTCAGCAGGGAGCATT
GGTAAATACAGGGGTTGCCTTGGTCGACTTCGATTCGCCAGGAAACCAATTTGCGTCATA
GACCTTATGGTGGTTAGCGCATCTGTTGTTATATTGCTCGTCGGGAGAAATGGGAACGTT
TTCGCTGCATCTGCTATCAGAGGCATCCGATTTCTCCAGATATTACGTATGTTACATGTT
GATCGACAAGGAGGAACATGGCGGCTGTTGGGTAGCGTCGTATACATTCACCGACAAGAG
TTAATCACCACTTTATACATTGGGTTTCTTGCTCTTATATTTTCATCGTACTTCGTATAT
CTGGCGGAGAAACCGGCACCAGAATCTTTCAAGAACGGTACTTCCCCTACTGGTAAATTC
CGGAGTTACGCCGATGCTTTATGGTGGGGTGTGGTCACAGTTACTACGATTGGCTACGGT
GATCACGTGCCGATCACGTGGTTGGGCAAAGTGATTGCGTCATGCTTCTCCATTTTCGCG
ATTTCTTTTTTCGCGCTTCCAGCTGGGATTTTAGGATCCGGGTTCGCTTTAAAAGTCCAG
CAGAAACAGAGACAAAAACAATTTAACCGACAAATACCGGCGGCTGCTGCTTTAATTCAA
GCAACATGGCGTTGTTACGCAACTTCCGTCGGCACCAATTGTTCCGCTACGTGGAGGTTG
TTCAAGATAGCTGGTAACCATCGCAACAGTGACGTCACAAATTGTGATGACGTATTTATC
GAAGAAACACAGCCAAGGCCAAATACAACAAAAAAATCTCGTTGCGCCCTCTCACGGTTG
CATTTAGATATTCCAATATTCCGCACGAGGCCGCCATTGAGTAAGGAAGATAAATCGCAG
TCGATTCCGTTCGAAATCGGGATCGACGTTGATGAAAACCCCGCAGATGGGTGTATGGAA
CAGAACACACATGTTGCAACGACTAACACTGCTCCGCCAGGCGATAATAAATATGTTCCA
TTTATTCATATCTGTGCAATTCATTACAGAATGCCCGAGTCTTATAAGAACGTCGTCCGC
GCAACAAGACGACTTATTTACTTTCTTGCGAAGAAAAGGTTCCAGCGATCTCGGAAGCCA
TATGACGTACGTGACGTGGTGGAACAATATTCACAAGGTCACGCAAACGTCATGATGAGA
ATAAAGGAGCTCCAGCGAAGGTTGGATCTCACGTTGGGGAAACCTTCGTCGTTTACTGAC
TGCCAATTCACAGCAGGCGAGCTAGGGAGTAATTCTCCAGTCAACGATCGGCAGAGGTTA
ACCGCTGGAGGTCGTCTTTTACGTCTTGAAAAATGGACTGAAACAACCGACAGAAAACTC
GACGCCATTTTTAAACTTTTGGAAAAACTCAACGAGAAATGA
| PANTHER |
VG_K_chnl (IPR028325) - T[15-565] 6.5E-235 |
| PRINTS |
VG_K_chnl (IPR028325) - T[55-83] 4.9E-21 - T[97-120] 4.9E-21 - T[171-197] 4.9E-21 - T[200-223] 4.9E-21 - T[240-262] 4.9E-21 - T[269-295] 4.9E-21 |
| Pfam |
Ion_trans_dom (IPR005821) - T[64-298] 1.2E-25 |
| PRINTS |
K_chnl_volt-dep_KCNQ (IPR003937) - T[105-124] 2.6E-24 - T[125-144] 2.6E-24 - T[187-206] 2.6E-24 |
| Pfam |
K_chnl_volt-dep_KCNQ_C (IPR013821) - T[450-567] 5.0E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KCNQ1_HUMAN | 54.766 % | 526 | 0 |
| KCNQ3_HUMAN | 38.761 % | 367 | 3.14E-117 |
| KCNQ5_HUMAN | 39.964 % | 398 | 2.15E-128 |