- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C8.101.v1....' >
- Clone 'cibd047j04' >
- Transcript 'KH2012:KH.S1494.3.v1...' >
- Transcript 'KH2012:KH.S2060.1.v1...'
Transcript Model
Transcript Id
KH2012:KH.S2060.1.v1.A.ND1-1
Possible name(s)
ZNF235; ZNF525; ZNF570
Gene model
Location
KhS2060 [2,877 / 4,455]
Amino acid sequence
Length: 227
>KH.S2060.1.v1.A.ND1-1
CEIIQQYLKQNQLKLLSSHCLGDNYNRMSDVQRTGQEILDSESQLNNGTRCVVCDKELKH
RSRLLVHLRTHTGERPFKCKICKKAFNELRDLKDHHKRIHEKHRPHMCEFCDKCFVDVGT
LKKHCRIHIGAKPHTCKHCDKSFIHRGHLNLHELIHTGERPFMCDLCPKSFKRKEHVTIH
KVSHSGEKPFKCKNCNKTFGMIGSLRAHNRKVDCVPVNASGLKELTC
Nucleotide sequence
Length: 1,578
>KH2012:KH.S2060.1.v1.A.ND1-1
TGTCGCCACTGACCAATGGTATATGTTAGTGTGAAATTATACAGCAATATCTAAAACAAA
ATCAATTAAAGCTTTTATCTTCGCACTGTTTGGGTGACAACTACAACAGAATGTCTGATG
TTCAACGGACAGGTCAGGAAATTTTGGACAGTGAATCACAATTAAATAATGGAACCAGAT
GCGTTGTTTGTGATAAGGAATTGAAACATCGAAGCAGACTGTTGGTGCATTTGCGAACTC
ACACGGGTGAAAGGCCGTTCAAATGTAAAATTTGTAAAAAGGCTTTTAATGAACTTCGTG
ATCTAAAAGATCACCATAAGAGAATTCACGAGAAACACAGACCTCACATGTGTGAATTTT
GTGACAAATGTTTTGTTGATGTTGGTACGCTGAAGAAACACTGTCGAATTCACATTGGTG
CAAAACCACACACGTGCAAACATTGCGACAAGTCATTTATACACCGAGGACACCTCAACT
TACATGAGCTTATCCACACGGGGGAAAGACCATTTATGTGTGATTTGTGTCCAAAATCAT
TCAAACGCAAGGAACATGTTACAATTCACAAAGTATCTCATTCTGGAGAAAAGCCCTTTA
AATGTAAAAACTGCAATAAAACATTCGGGATGATTGGTAGTTTAAGGGCACATAATAGAA
AGGTTGATTGTGTACCAGTCAACGCCTCAGGTTTAAAAGAATTGACTTGTTAAAGAGTTG
CTCTTGTTTCATAATATACTTGGGTGGAGAAAGACGGGACGCCTTTAGCATAAAATATCT
AAATGTCCTGATCGTATTTTAAATAATTAACAACGGGCTATGCAAGTCGTGGGGATACGA
TTTTATAATTCTTTTAATGTTCGTTGTTTACTATCAAATGGGACGAGACAATAGAAGAAA
ATTATGTCCCATCTTTCCCCACTCTACTAGACTTTGTTACTTTTGATGTTTTGTTGTACA
TTAGGGTGGGGACTGGGGAATATGGGACACCTTTTCATTCCATTTTCTTGTTCCAATCGA
TATACTTCTTGTAGCGGGCACTATTGCGCATGCGAAGTAGGTCGGAACAAATATAATGAC
CACCCGGTCCAAATTTATTACGTCTCCCCGTTGAAAACGTTCCAAACTCGTTTACACGTT
AAAACTTTAGTTTTTGATTTAAAGTCAGCAGAACTGAGTTAGGTATGTTATTTGAAGCCC
ATAAGCAAGTACTACTAACAAACTTGTTTTATGCTGGTTTAATTAGCATATTTTACTTAA
TTTACTAACACTTCTCATTCAAAATTACTTGTAAAATCTCTATCTATGTACAAATTTTCA
TTTTTCGTTGGTATGCCCCTTTAGAATAGAAATTGAATACTTGAATGTAGGGATATGGTA
TCCCACCAGCACGGAAACCAACAATATGACGGTGAATCCAATGTAAATTGAATGCACTTT
TGTTTAGGGGTGTTATACCCAGAGCCATAGACTTTGGTTTTACCAATGTAAATAACTATT
ATAACTAGTTATATATACATTGGTTATACCGAAGCCAATGCATTTGGCACTGCTCAATGG
TAAAAGGCTTATTCAAAT
| SMART |
Znf_C2H2_type (IPR013087) - T[49-71] 0.23 - T[77-100] 0.0094 - T[106-128] 0.039 - T[134-156] 0.073 - T[162-184] 0.094 - T[190-210] 32.0 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[49-76] 13.609 - T[77-105] 13.11 - T[106-133] 13.027 - T[134-161] 14.856 - T[162-189] 14.316 - T[190-212] 9.162 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[51-71] . - T[79-100] . - T[108-128] . - T[136-156] . - T[164-184] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[60-115] 6.6E-16 - T[115-171] 6.8E-18 - T[156-208] 3.87E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN235_HUMAN | 42.236 % | 150 | 4.57E-42 |
| ZN583_HUMAN | 45 % | 148 | 1.22E-41 |
| ZN570_HUMAN | 41.875 % | 148 | 6.81E-42 |