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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'
  2. Transcript 'KH2012:KH.L18.17.v1....'
  3. Clone 'cien89761'
  4. Transcript 'KH2012:KH.S2011.1.v1...'

Transcript Model

Transcript Id

KH2012:KH.S2011.1.v1.A.ND1-1

Possible name(s)

NLRP12; NLRP14; NOD1

Location

KhS2011 [1 / 4,729]

Sequences

Amino acid sequence

Length: 817

>KH.S2011.1.v1.A.ND1-1
ASYIVDIMERLGNAFRRLRRVFRRRRRNEARDPRVQTTEEIDGVVVAASRSNDQQPVIIN
NPNEVYFYNRPPPTNVDVQTLVEELIRILSKIIKELRGEALLPAGVLVPGRITKPVPLLI
TKVRQILDDEWKLHRNQRKDLQQMYTPEGSILIEELFDFAKQVAQQEADKMCNTPEAKAM
HVVKYGNIVCAVGLPGVGKSTLLKMLINCIVVDKSVKPDTQFLFHVSLKKFNPKKKVTLL
EFLLYGNLSEWNHSDEENKALVHFLYNNPNVVILIDGWDELYTKQANKRLHECQLDSKQI
PEVFVKNLLMGNLLPNAVKFITSRPGQFYELHPDYRQGLVSEVRGMDKPAKWDLTKQMCG
EANLETVEKYLADRPNLDALCSIPVNCIQIVACLHSSVSSGREINSMTDVFIHTLTNYKA
SDHVKTNMSERAIGQELVKLAHLAYKGLTERKLVFQQADFEEVRINKQTVDIFLHTYVEK
SHHLKMRILEGKKRSYFTHLTSHEFYAALHLMLFMSQEEFRRCMDTFKDPHWEVVTRFLF
GICNSTSYEDLKVIFPASMIKDYKEKKNILKSLILLKHDTSKDVIRLSGWVHEANDAEIS
QRFQECMPQLISTSLSYPTEASDVVFAFRTFTTPHYLDLNMDGLDEASAETLLRGLHGSQ
TKIKELGIKRVRMTDSTTQALLPHLVVMDKLGLGSWLDVMNLNPYMEDISRKIMDRQNKI
QLYIVASLDENATHWLTRCLSNVSDLTISEEKLSAQNRIILHEAVERLTNPQGLTVNDIN
GDRWPKYWELCGDQPDDDVMQILQLPLGKVRTMXIFS

Nucleotide sequence

Length: 2,640

>KH2012:KH.S2011.1.v1.A.ND1-1
AGAAGTGTAATAATTATTGACAACTATGGTGACCATGATTATAGGTAATATCTACTGTCC
TACTGATATACACTTGTAATAAACCCTGGATTGGCAAACACAAGGAGACACATTCGTTGC
AAACTCTGCAAATCACACAGATGAACAAAATAAGCATCATATATAGTTGATATCATGGAA
AGGTTGGGAAATGCCTTCAGAAGGTTACGAAGGGTGTTTAGAAGAAGGAGAAGAAATGAA
GCCAGGGATCCCCGGGTTCAAACAACAGAGGAAATAGATGGAGTTGTGGTTGCCGCTTCA
AGATCAAATGATCAACAACCAGTGATAATAAACAACCCAAATGAAGTTTACTTTTACAAC
CGACCCCCACCAACCAATGTTGATGTTCAAACACTTGTTGAAGAATTAATAAGAATATTA
AGCAAAATAATAAAAGAACTTCGTGGGGAAGCCCTCTTGCCAGCGGGAGTTTTAGTTCCA
GGTCGTATCACCAAGCCTGTTCCACTTCTAATAACCAAGGTCCGACAAATATTAGATGAT
GAATGGAAGCTACATAGAAACCAACGTAAGGACTTGCAACAAATGTACACACCAGAAGGT
TCTATACTGATTGAGGAACTGTTTGATTTTGCAAAACAAGTGGCTCAACAAGAAGCAGAC
AAGATGTGTAATACACCTGAAGCCAAGGCCATGCATGTAGTAAAGTATGGTAACATTGTT
TGTGCAGTTGGACTACCTGGGGTTGGTAAAAGCACTCTTTTAAAGATGTTGATCAACTGT
ATTGTTGTAGATAAATCAGTGAAACCAGATACACAGTTTTTGTTCCACGTCTCACTGAAG
AAATTTAACCCAAAGAAGAAAGTTACTCTGTTAGAATTTCTTCTATATGGCAACTTGAGT
GAGTGGAATCATTCTGATGAAGAGAACAAAGCTTTGGTTCATTTCCTGTACAACAATCCA
AATGTTGTTATTTTGATTGATGGATGGGATGAACTGTATACAAAACAAGCCAACAAAAGG
CTCCATGAGTGTCAACTGGATAGCAAGCAAATACCAGAGGTCTTTGTCAAGAACTTGTTG
ATGGGGAATCTTCTACCTAATGCTGTGAAATTTATCACATCAAGACCAGGTCAGTTTTAC
GAGCTTCACCCTGATTATCGACAAGGTTTGGTTTCTGAGGTGCGTGGTATGGATAAACCT
GCAAAGTGGGATCTTACTAAACAGATGTGTGGTGAAGCCAATCTTGAAACTGTGGAAAAA
TATTTGGCAGATCGTCCAAACTTGGATGCTTTGTGTTCAATTCCAGTCAACTGTATTCAG
ATTGTAGCTTGTCTCCATTCAAGCGTGTCATCTGGTCGTGAGATCAACTCAATGACTGAT
GTGTTCATTCATACTCTTACCAACTACAAAGCTTCAGATCATGTAAAAACAAACATGTCA
GAACGAGCAATTGGACAGGAACTGGTTAAACTTGCTCACCTTGCATACAAAGGGCTCACC
GAAAGAAAGTTGGTGTTTCAGCAAGCTGACTTTGAAGAAGTAAGAATCAACAAACAAACT
GTTGATATATTTCTGCACACCTATGTTGAAAAGTCCCATCATTTAAAAATGAGAATCTTG
GAAGGAAAGAAACGAAGTTACTTCACCCATCTCACCTCGCACGAGTTTTACGCCGCTTTG
CACTTAATGTTGTTCATGTCACAAGAAGAATTCCGCAGATGTATGGACACTTTCAAAGAT
CCACATTGGGAAGTCGTGACCCGATTTTTATTTGGTATTTGTAACTCCACTTCATATGAA
GATCTGAAAGTGATTTTCCCAGCTTCGATGATTAAAGATTACAAGGAGAAGAAGAATATT
CTCAAGTCTTTAATTTTACTTAAACATGATACAAGTAAAGATGTGATCAGATTGTCAGGT
TGGGTACATGAAGCCAACGATGCAGAAATATCGCAAAGGTTTCAAGAGTGCATGCCACAG
CTTATAAGCACATCACTTAGTTATCCCACAGAAGCCTCTGATGTTGTGTTCGCATTCCGC
ACCTTCACAACTCCTCACTACCTGGACCTCAACATGGATGGTTTAGATGAAGCTTCAGCT
GAAACTTTGCTTCGAGGATTGCATGGAAGTCAAACAAAGATCAAAGAATTAGGTATCAAA
AGGGTGCGCATGACAGATTCAACGACACAAGCCCTTCTTCCTCATCTTGTTGTGATGGAT
AAGCTTGGTTTGGGATCTTGGCTCGATGTCATGAACCTGAACCCCTACATGGAAGATATA
TCCAGGAAAATAATGGATCGGCAAAACAAAATACAGCTTTATATAGTTGCATCACTGGAT
GAGAATGCTACACACTGGTTAACCCGGTGTCTTTCTAATGTGAGTGACTTAACAATAAGT
GAGGAGAAACTTTCTGCACAAAATCGTATCATCTTACATGAGGCTGTTGAACGACTAACA
AACCCACAAGGTTTGACAGTGAATGACATCAATGGTGATCGATGGCCAAAGTATTGGGAA
TTGTGTGGAGATCAACCAGATGATGATGTAATGCAAATCTTACAACTTCCACTTGGAAAA
GTAAGAACCATGANAATATTCAGTTAGATTATCAAACATGTATTGCAGATTATTATTTAT

InterProScan

ProSiteProfiles
NACHT_NTPase (IPR007111) - T[187-326] 14.137
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[187-366] 1.02E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value