- Transcript 'KH2012:KH.C2.424.v2....' >
- Transcript 'KH2012:KH.S1440.1.v1...'
Transcript Model
Transcript Id
KH2012:KH.S1440.1.v1.A.nonSL2-1
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
KhS1440 [5,411 / 7,790]
Amino acid sequence
Length: 396
>KH.S1440.1.v1.A.nonSL2-1
QTHFKHPSPLLKQPKENKMSDSEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPR
HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE
EHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVMDAGDGV
SHNVPIYEGYALPHAIARLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYV
ALDFEQEMATAASSTSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTY
NSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV
WIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,259
>KH2012:KH.S1440.1.v1.A.nonSL2-1
AACAAACTCACTTCAAGCATCCATCTCCACTTCTCAAGCAACCAAAAGAAAACAAAATGT
CGGACTCCGAAGAAGACCAAACCGCGCTTGTGTGCGACAACGGTTCAGGATTAGTGAAAT
CTGGTTTCGCCGGTGACGACGCACCTCGTGCCGTCTTCCCGTCCATCGTTGGCCGACCTA
GACATCAGGGTGTCATGGTCGGTATGGGACAAAAAGACAGCTATGTCGGTGACGAAGCAC
AAAGTAAGCGAGGTATCCTTACCTTGAAATACCCGATCGAGCACGGTATCATCACCAACT
GGGACGACATGGAAAAGATCTGGCATCACACTTTCTACAACGAACTCCGTGTTGCTCCCG
AAGAACACCCGACTCTGCTTACCGAAGCTCCACTTAACCCAAAGGCCAACCGGGAAAAGA
TGACTCAGATCATGTTTGAAACCTTCAACGTACCGGCCATGTACGTCGCCATCCAAGCCG
TGTTGTCGCTCTACGCATCTGGACGAACAACAGGTATTGTTATGGATGCTGGTGACGGTG
TTTCACATAACGTTCCCATCTATGAGGGTTACGCGCTCCCGCACGCCATCGCCCGGTTGG
ATTTAGCCGGACGAGATCTGACCGATTATTTAATGAAGATCTTGACAGAGCGAGGATATT
CCTTCGTCACAACAGCCGAGCGTGAAATCGTCCGTGACATCAAAGAGAAGCTTTGTTACG
TGGCGCTCGACTTCGAGCAGGAGATGGCCACCGCAGCATCCTCCACCTCCCTAGAGAAGA
GCTACGAACTTCCCGATGGTCAAGTCATCACCATCGGAAACGAGAGGTTCCGATGCCCGG
AGACTCTCTTCCAACCTTCGTTTATCGGTATGGAATCTGCTGGAATCCACGAGACCACCT
ACAACTCCATCATGAAGTGCGACATCGACATCCGAAAGGATCTTTACGCCAACAACGTCC
TCTCCGGAGGTACAACCATGTACCCTGGTATCGCTGACAGAATGCAGAAGGAAATCACTG
CTCTTGCTCCCAGCACCATGAAGATCAAAATCATTGCTCCTCCAGAGAGGAAATACTCGG
TCTGGATCGGAGGATCCATCCTCGCATCTCTCTCCACCTTCCAACAGATGTGGATCACCA
AACAAGAATACGACGAAGCCGGCCCATCCATCGTCCACAGAAAATGTTTCTAGATTATAA
ACTTTGACACAACCCCCTCCAGCATATGGGCTTATTTAAATAAAACATTTCTACACGAA
| PANTHER |
Actin (IPR004000) - T[23-395] 2.4E-266 |
| Pfam |
Actin (IPR004000) - T[25-396] 4.2E-147 |
| SMART |
Actin (IPR004000) - T[26-396] 2.0E-232 |
| PRINTS |
Actin (IPR004000) - T[47-56] 3.2E-57 - T[70-81] 3.2E-57 - T[82-104] 3.2E-57 - T[136-149] 3.2E-57 - T[161-180] 3.2E-57 - T[257-273] 3.2E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[74-84] . - T[377-385] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[125-137] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.059 % | 766 | 0 |
| ACTS_HUMAN | 97.059 % | 767 | 0 |
| ACTC_HUMAN | 96.825 % | 766 | 0 |