- Transcript 'KH2012:KH.L119.19.v1...' >
- Region 'REG00000697' >
- Transcript 'KH2012:KH.S1404.2.v1...'
Transcript Model
Transcript Id
KH2012:KH.S1404.2.v1.A.ND2-1
Possible name(s)
IRF4; IRF8; IRF9
Gene model
Location
KhS1404 [1,184 / 4,060]
Amino acid sequence
Length: 536
>KH.S1404.2.v1.A.ND2-1
RDIFVTMETADEIRELAPEYRDRLRTWLIKMIESGKIPGLMWENPEKTIFRMPWKHAGRQ
DYNLEEDSKIFMAWAKHSGRYREGVDKPEPIVWKTRLRCALNKMPDIQEIPERSRLDISE
PYRVYRLLPPVHKASQIRRRLFKRSQSHDTDAMTSYGNPLPTSSRVTSQINNQRRSSSIE
LSERQPLTSPPGLMTSPPSLMTSPNLWYPPSYPLKHQLSSYQLLGRNNLEGGFNLGRSPL
PPLNPPFHTSLAPLTPFLSGGNTSLALRHQPTSVMSHVHNMAAQVFAVEHKYRSQLNLTR
KLEAENESLKASEQAMCRRLNEVGVAGDEIIGGASTHSLFEKLSKTEERVRSLERELAQY
RSAHARERCARERLEAEREKMQNILGRIETSTSFNDDVIVSKQTEKSETHMTSAVADVKP
YVTHHVNKTSMSLKRINSPLDLSVEATSSKNRKSSFDQSRDTTWSEDFLTNRRHSNVTSP
PTFRVIPMTSQEEKPSSRSSCSSDSTTSRDSYRGRSLSPPQRSSHLASHRNTIQVT
Nucleotide sequence
Length: 1,786
>KH2012:KH.S1404.2.v1.A.ND2-1
TTGTTTCGTGATAAAGGTAACTGTGAAGTAATAAAGGTAATTGTGACGTGATATTTTTGT
TACCATGGAAACAGCAGATGAGATTCGAGAATTGGCACCGGAGTATCGCGATCGACTTCG
AACATGGCTTATTAAGATGATCGAAAGCGGGAAAATCCCTGGACTTATGTGGGAAAACCC
GGAAAAAACAATTTTCCGGATGCCATGGAAACATGCAGGGCGACAAGATTATAACTTGGA
GGAGGACTCGAAAATATTTATGGCGTGGGCCAAACACAGTGGGAGATACAGAGAGGGAGT
TGACAAACCTGAACCAATAGTTTGGAAAACAAGACTTCGCTGCGCGTTGAATAAGATGCC
GGATATTCAAGAAATTCCCGAACGCAGTCGTCTTGATATCAGCGAACCTTACAGAGTGTA
CAGACTCTTACCACCAGTTCATAAAGCTTCGCAAATTCGACGACGTTTGTTTAAAAGGAG
TCAAAGTCATGATACCGATGCTATGACGTCATATGGGAATCCCCTCCCTACGTCATCGCG
TGTGACGTCACAAATAAACAACCAACGTCGAAGTAGTTCGATTGAGCTATCAGAACGACA
ACCACTGACGTCACCACCAGGTCTCATGACGTCACCACCAAGCCTCATGACGTCACCTAA
CCTATGGTACCCTCCATCTTACCCATTGAAACATCAATTATCGTCTTACCAACTATTGGG
AAGGAATAACTTGGAAGGGGGTTTTAACTTAGGTAGATCCCCGTTACCCCCCTTAAACCC
ACCCTTTCATACGTCACTTGCCCCACTTACCCCTTTTCTATCGGGGGGGAACACCAGTCT
TGCATTACGTCATCAACCTACGTCAGTGATGAGTCACGTGCACAATATGGCTGCCCAGGT
GTTCGCTGTCGAGCATAAATATCGTTCTCAACTCAATTTAACGCGAAAGCTCGAAGCCGA
GAACGAAAGTTTAAAAGCTTCTGAACAAGCCATGTGCCGGAGGCTAAATGAGGTTGGAGT
GGCTGGGGACGAAATAATTGGTGGTGCATCGACTCACAGTTTATTCGAGAAATTGTCGAA
AACTGAAGAGCGCGTGCGCAGTCTGGAGAGGGAACTTGCGCAGTACCGTAGTGCGCATGC
ACGTGAAAGATGCGCACGAGAACGCCTTGAAGCAGAAAGAGAGAAAATGCAAAATATTCT
TGGTCGTATTGAAACGTCTACGTCATTCAATGATGACGTCATTGTTAGCAAACAAACCGA
AAAAAGTGAAACACACATGACGTCAGCAGTTGCTGACGTCAAACCATACGTCACACACCA
CGTGAATAAAACATCAATGTCTCTCAAGCGAATAAATTCACCTCTGGATTTATCGGTTGA
GGCTACGTCATCGAAAAACCGGAAATCATCTTTCGACCAATCACGAGATACCACGTGGTC
GGAAGATTTTTTAACAAATCGACGTCATAGCAACGTGACGTCACCACCAACGTTTCGAGT
GATTCCTATGACGTCACAAGAGGAAAAGCCGTCATCGCGATCTTCATGCTCCAGTGATTC
AACCACCTCACGTGATTCCTATCGAGGTCGCTCTTTATCGCCGCCCCAGCGCTCATCTCA
TCTTGCTTCTCATAGAAATACAATACAAGTTACGTGACTATCGTCGCCCAATGACAAACC
GTAGTTTCTTTTCCCGCCAAATTCAAAGATTTGTTCCAAACCAATCACACAACGCTACGT
CATCGTTTTTCTAATTTTCAAATAAAAACTTTTTTGCGATTTTAAC
| PANTHER |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[12-531] 1.3E-85 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[17-129] 8.2E-45 |
| SMART |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[17-130] 8.7E-54 |
| ProSiteProfiles |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[21-129] 43.435 |
| PRINTS |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[23-42] 1.9E-23 - T[49-62] 1.9E-23 - T[67-84] 1.9E-23 - T[90-112] 1.9E-23 |
| CDD |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[23-129] 5.19444E-42 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[23-129] 1.81E-41 |
| Pfam |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[23-127] 1.0E-39 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IRF8_HUMAN | 64.486 % | 161 | 4.53E-44 |
| IRF4_HUMAN | 58.088 % | 169 | 5.09E-47 |
| IRF9_HUMAN | 54.63 % | 151 | 1.0E-40 |