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  1. Transcript 'KH2012:KH.S1029.2.v2...'

Transcript Model

Transcript Id

KH2012:KH.S1029.2.v2.B.SL5-1

Possible name(s)

AP4B1; COPG1; COPG2

Gene model

KH2012:KH.S1029.2

Location

KhS1029 [0 / 6,770]

Sequences

Amino acid sequence

Length: 588

>KH.S1029.2.v2.B.SL5-1
GNNPYAYIERNVVLQEARIFQQTPINPRKCTEILTKIIYLINQGEVITTNEATETFFAMT
KLFQSNDVILRRMCYLTIKEMSKMTENAFIVTQSLTKDMNGREDIFRAAAVRALCAITDH
STLQGIERYMKQAIVDKVHSVSSAALVSSLHLTKDAFDVVKRWVNEVQESCSNDSIMVQY
HALGLLYHLRKKDRLGTSKMVSKFMKSGLKSPFAYCMLIRIASKLLEEDDAGHDSPLFNF
IESCLRNKHELVIYEAASAIVNMPNCSARELAPAVSVLQLFLSSPKPSFRYAGVRTLNKV
AMKHPSAVTACNLDLENLITDVNRSIATLAITTLLKTGSESSVDRLMKQITSFMSEISDE
FKVVVVRAISDLCQKYPRQHAVMMNYLASMLRDEGGFDYKKAIVECIISILEESTESKES
GLAHLCEFIEDCEHTVLATKIIHLLGREGPKTPNPSKYIRYIYNRVILENEAVRAAAVSA
LARFGAQCDDLLSSILSLLSRSMMDEDDEVRDRATFYFHTLQQKQKALNSVYILNGLAVS
VPALERCLQQYLKEPSSEKFNMKSVPLVSIPDGEPKADLITAVRKTN+

Nucleotide sequence

Length: 1,763

>KH2012:KH.S1029.2.v2.B.SL5-1
GTGGAAACAACCCATATGCTTACATTGAGCGAAACGTGGTGTTGCAAGAAGCGAGAATTT
TCCAACAGACTCCAATTAACCCAAGAAAATGTACGGAAATATTGACCAAGATAATTTACC
TTATTAACCAAGGAGAAGTGATAACTACAAACGAAGCAACAGAAACTTTCTTTGCCATGA
CAAAGCTGTTCCAGTCTAATGACGTGATTTTAAGAAGAATGTGCTATTTGACTATCAAAG
AAATGTCAAAAATGACAGAAAATGCATTCATTGTAACACAGAGTCTCACAAAAGACATGA
ATGGGCGTGAAGATATTTTCCGAGCTGCTGCAGTTCGTGCTTTGTGTGCAATTACTGATC
ATAGCACACTACAAGGCATTGAAAGATACATGAAACAAGCCATTGTGGATAAGGTTCACT
CTGTATCAAGTGCGGCATTGGTGTCCTCGCTCCATCTGACTAAAGATGCGTTTGATGTGG
TAAAACGATGGGTGAATGAGGTTCAGGAATCCTGCTCCAACGACAGCATCATGGTGCAGT
ATCATGCTCTTGGTCTGTTGTATCATCTACGGAAAAAAGATAGATTGGGAACATCCAAGA
TGGTGAGCAAGTTCATGAAATCTGGATTGAAATCTCCATTTGCATACTGCATGTTGATCA
GGATAGCAAGCAAACTGCTGGAAGAAGATGATGCAGGCCATGATAGCCCTCTGTTCAACT
TCATTGAGAGTTGTTTAAGAAACAAACATGAGTTGGTGATATACGAAGCAGCGTCCGCCA
TTGTCAACATGCCAAACTGCTCTGCACGAGAATTAGCTCCTGCCGTTTCTGTTCTTCAGC
TCTTCCTCAGTTCACCAAAGCCTTCTTTTAGATATGCTGGTGTGAGAACTCTTAATAAGG
TTGCCATGAAACACCCATCGGCTGTTACAGCTTGTAACTTGGACTTGGAGAATTTGATCA
CTGATGTCAATAGAAGTATTGCTACTCTTGCTATTACTACTTTGTTGAAGACTGGAAGTG
AAAGCAGTGTTGACCGTTTGATGAAACAAATCACTTCGTTTATGTCGGAAATTTCCGATG
AATTTAAAGTGGTTGTCGTCCGTGCAATATCTGATCTGTGTCAGAAATATCCTCGCCAAC
ATGCTGTAATGATGAACTACCTTGCATCTATGTTAAGAGATGAGGGTGGATTTGATTACA
AGAAAGCTATTGTAGAATGTATTATTTCTATCCTGGAGGAATCAACTGAATCTAAAGAAA
GTGGTCTTGCTCATCTGTGTGAGTTTATTGAGGATTGTGAACATACTGTGCTTGCTACCA
AGATCATTCATTTGCTTGGTAGAGAAGGCCCAAAAACTCCAAATCCATCGAAATATATTC
GGTATATTTATAATCGAGTGATACTTGAAAACGAAGCTGTAAGAGCAGCTGCTGTTTCTG
CTCTTGCTCGTTTTGGAGCTCAGTGCGACGATCTTCTTTCCAGCATCCTCTCTCTTCTCT
CAAGATCAATGATGGATGAAGACGATGAAGTTAGAGACCGAGCAACATTTTACTTCCACA
CACTTCAACAGAAACAGAAGGCACTCAACTCAGTGTACATCTTAAATGGACTTGCTGTGT
CAGTACCAGCATTAGAAAGATGTTTGCAACAATATTTGAAGGAACCTTCCAGTGAAAAAT
TTAACATGAAATCTGTTCCATTAGTTTCAATACCTGATGGGGAACCAAAAGCAGACTTAA
TTACTGCTGTTCGGAAAACAAAC

InterProScan

PANTHER
Coatomer_gsu (IPR017106) - T[1-582] 0.0
Gene3D
ARM-like (IPR011989) - T[7-297] 9.0E-102 - T[364-537] 1.4E-5
SUPERFAMILY
ARM-type_fold (IPR016024) - T[10-530] 3.84E-90
Pfam
Clathrin/coatomer_adapt-like_N (IPR002553) - T[10-524] 1.3E-123

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
COPG2_HUMAN 74.53 % 905 0
COPG1_HUMAN 74.446 % 895 0