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  1. Transcript 'KH2012:KH.S1029.2.v1...'

Transcript Model

Transcript Id

KH2012:KH.S1029.2.v1.B.nonSL4-1

Possible name(s)

AP4B1; COPG1; COPG2

Gene model

KH2012:KH.S1029.2

Location

KhS1029 [0 / 7,122]

Sequences

Amino acid sequence

Length: 610

>KH.S1029.2.v1.B.nonSL4-1
LLLYTQLIIMPGIRKDKDEEIGGNNPYAYIERNVVLQEARIFQQTPINPRKCTEILTKII
YLINQGEVITTNEATETFFAMTKLFQSNDVILRRMCYLTIKEMSKMTENAFIVTQSLTKD
MNGREDIFRAAAVRALCAITDHSTLQGIERYMKQAIVDKVHSVSSAALVSSLHLTKDAFD
VVKRWVNEVQESCSNDSIMVQYHALGLLYHLRKKDRLGTSKMVSKFMKSGLKSPFAYCML
IRIASKLLEEDDAGHDSPLFNFIESCLRNKHELVIYEAASAIVNMPNCSARELAPAVSVL
QLFLSSPKPSFRYAGVRTLNKVAMKHPSAVTACNLDLENLITDVNRSIATLAITTLLKTG
SESSVDRLMKQITSFMSEISDEFKVVVVRAISDLCQKYPRQHAVMMNYLASMLRDEGGFD
YKKAIVECIISILEESTESKESGLAHLCEFIEDCEHTVLATKIIHLLGREGPKTPNPSKY
IRYIYNRVILENEAVRAAAVSALARFGAQCDDLLSSILSLLSRSMMDEDDEVRDRATFYF
HTLQQKQKALNSVYILNGLAVSVPALERCLQQYLKEPSSEKFNMKSVPLVSIPDGEPKAD
LITAVRKTN+

Nucleotide sequence

Length: 1,891

>KH2012:KH.S1029.2.v1.B.nonSL4-1
ATAACATTTCGTAACGTGAGAACAAAATACGGAATTGTTTTAGTTATACTTTAGCAAAAT
TTGACTTTTGTTGTATACCCAACTTATAATAATGCCTGGGATTCGTAAAGATAAAGACGA
AGAGATAGGTGGAAACAACCCATATGCTTACATTGAGCGAAACGTGGTGTTGCAAGAAGC
GAGAATTTTCCAACAGACTCCAATTAACCCAAGAAAATGTACGGAAATATTGACCAAGAT
AATTTACCTTATTAACCAAGGAGAAGTGATAACTACAAACGAAGCAACAGAAACTTTCTT
TGCCATGACAAAGCTGTTCCAGTCTAATGACGTGATTTTAAGAAGAATGTGCTATTTGAC
TATCAAAGAAATGTCAAAAATGACAGAAAATGCATTCATTGTAACACAGAGTCTCACAAA
AGACATGAATGGGCGTGAAGATATTTTCCGAGCTGCTGCAGTTCGTGCTTTGTGTGCAAT
TACTGATCATAGCACACTACAAGGCATTGAAAGATACATGAAACAAGCCATTGTGGATAA
GGTTCACTCTGTATCAAGTGCGGCATTGGTGTCCTCGCTCCATCTGACTAAAGATGCGTT
TGATGTGGTAAAACGATGGGTGAATGAGGTTCAGGAATCCTGCTCCAACGACAGCATCAT
GGTGCAGTATCATGCTCTTGGTCTGTTGTATCATCTACGGAAAAAAGATAGATTGGGAAC
ATCCAAGATGGTGAGCAAGTTCATGAAATCTGGATTGAAATCTCCATTTGCATACTGCAT
GTTGATCAGGATAGCAAGCAAACTGCTGGAAGAAGATGATGCAGGCCATGATAGCCCTCT
GTTCAACTTCATTGAGAGTTGTTTAAGAAACAAACATGAGTTGGTGATATACGAAGCAGC
GTCCGCCATTGTCAACATGCCAAACTGCTCTGCACGAGAATTAGCTCCTGCCGTTTCTGT
TCTTCAGCTCTTCCTCAGTTCACCAAAGCCTTCTTTTAGATATGCTGGTGTGAGAACTCT
TAATAAGGTTGCCATGAAACACCCATCGGCTGTTACAGCTTGTAACTTGGACTTGGAGAA
TTTGATCACTGATGTCAATAGAAGTATTGCTACTCTTGCTATTACTACTTTGTTGAAGAC
TGGAAGTGAAAGCAGTGTTGACCGTTTGATGAAACAAATCACTTCGTTTATGTCGGAAAT
TTCCGATGAATTTAAAGTGGTTGTCGTCCGTGCAATATCTGATCTGTGTCAGAAATATCC
TCGCCAACATGCTGTAATGATGAACTACCTTGCATCTATGTTAAGAGATGAGGGTGGATT
TGATTACAAGAAAGCTATTGTAGAATGTATTATTTCTATCCTGGAGGAATCAACTGAATC
TAAAGAAAGTGGTCTTGCTCATCTGTGTGAGTTTATTGAGGATTGTGAACATACTGTGCT
TGCTACCAAGATCATTCATTTGCTTGGTAGAGAAGGCCCAAAAACTCCAAATCCATCGAA
ATATATTCGGTATATTTATAATCGAGTGATACTTGAAAACGAAGCTGTAAGAGCAGCTGC
TGTTTCTGCTCTTGCTCGTTTTGGAGCTCAGTGCGACGATCTTCTTTCCAGCATCCTCTC
TCTTCTCTCAAGATCAATGATGGATGAAGACGATGAAGTTAGAGACCGAGCAACATTTTA
CTTCCACACACTTCAACAGAAACAGAAGGCACTCAACTCAGTGTACATCTTAAATGGACT
TGCTGTGTCAGTACCAGCATTAGAAAGATGTTTGCAACAATATTTGAAGGAACCTTCCAG
TGAAAAATTTAACATGAAATCTGTTCCATTAGTTTCAATACCTGATGGGGAACCAAAAGC
AGACTTAATTACTGCTGTTCGGAAAACAAAC

InterProScan

PANTHER
Coatomer_gsu (IPR017106) - T[17-604] 0.0
Gene3D
ARM-like (IPR011989) - T[29-319] 9.8E-102 - T[385-559] 1.4E-5
SUPERFAMILY
ARM-type_fold (IPR016024) - T[32-552] 4.13E-90
Pfam
Clathrin/coatomer_adapt-like_N (IPR002553) - T[32-546] 1.5E-123

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
COPG2_HUMAN 74.493 % 910 0
COPG1_HUMAN 74.411 % 901 0