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  1. Transcript 'KH2012:KH.S1029.2.v1...'

Transcript Model

Transcript Id

KH2012:KH.S1029.2.v1.B.nonSL3-1

Possible name(s)

AP4B1; COPG1; COPG2

Gene model

KH2012:KH.S1029.2

Location

KhS1029 [0 / 7,110]

Sequences

Amino acid sequence

Length: 610

>KH.S1029.2.v1.B.nonSL3-1
LLLYTQLIIMPGIRKDKDEEIGGNNPYAYIERNVVLQEARIFQQTPINPRKCTEILTKII
YLINQGEVITTNEATETFFAMTKLFQSNDVILRRMCYLTIKEMSKMTENAFIVTQSLTKD
MNGREDIFRAAAVRALCAITDHSTLQGIERYMKQAIVDKVHSVSSAALVSSLHLTKDAFD
VVKRWVNEVQESCSNDSIMVQYHALGLLYHLRKKDRLGTSKMVSKFMKSGLKSPFAYCML
IRIASKLLEEDDAGHDSPLFNFIESCLRNKHELVIYEAASAIVNMPNCSARELAPAVSVL
QLFLSSPKPSFRYAGVRTLNKVAMKHPSAVTACNLDLENLITDVNRSIATLAITTLLKTG
SESSVDRLMKQITSFMSEISDEFKVVVVRAISDLCQKYPRQHAVMMNYLASMLRDEGGFD
YKKAIVECIISILEESTESKESGLAHLCEFIEDCEHTVLATKIIHLLGREGPKTPNPSKY
IRYIYNRVILENEAVRAAAVSALARFGAQCDDLLSSILSLLSRSMMDEDDEVRDRATFYF
HTLQQKQKALNSVYILNGLAVSVPALERCLQQYLKEPSSEKFNMKSVPLVSIPDGEPKAD
LITAVRKTN+

Nucleotide sequence

Length: 1,879

>KH2012:KH.S1029.2.v1.B.nonSL3-1
AACGTGAGAACAAAATACGGAATTGTTTTAGTTATACTTTAGCAAAATTTGACTTTTGTT
GTATACCCAACTTATAATAATGCCTGGGATTCGTAAAGATAAAGACGAAGAGATAGGTGG
AAACAACCCATATGCTTACATTGAGCGAAACGTGGTGTTGCAAGAAGCGAGAATTTTCCA
ACAGACTCCAATTAACCCAAGAAAATGTACGGAAATATTGACCAAGATAATTTACCTTAT
TAACCAAGGAGAAGTGATAACTACAAACGAAGCAACAGAAACTTTCTTTGCCATGACAAA
GCTGTTCCAGTCTAATGACGTGATTTTAAGAAGAATGTGCTATTTGACTATCAAAGAAAT
GTCAAAAATGACAGAAAATGCATTCATTGTAACACAGAGTCTCACAAAAGACATGAATGG
GCGTGAAGATATTTTCCGAGCTGCTGCAGTTCGTGCTTTGTGTGCAATTACTGATCATAG
CACACTACAAGGCATTGAAAGATACATGAAACAAGCCATTGTGGATAAGGTTCACTCTGT
ATCAAGTGCGGCATTGGTGTCCTCGCTCCATCTGACTAAAGATGCGTTTGATGTGGTAAA
ACGATGGGTGAATGAGGTTCAGGAATCCTGCTCCAACGACAGCATCATGGTGCAGTATCA
TGCTCTTGGTCTGTTGTATCATCTACGGAAAAAAGATAGATTGGGAACATCCAAGATGGT
GAGCAAGTTCATGAAATCTGGATTGAAATCTCCATTTGCATACTGCATGTTGATCAGGAT
AGCAAGCAAACTGCTGGAAGAAGATGATGCAGGCCATGATAGCCCTCTGTTCAACTTCAT
TGAGAGTTGTTTAAGAAACAAACATGAGTTGGTGATATACGAAGCAGCGTCCGCCATTGT
CAACATGCCAAACTGCTCTGCACGAGAATTAGCTCCTGCCGTTTCTGTTCTTCAGCTCTT
CCTCAGTTCACCAAAGCCTTCTTTTAGATATGCTGGTGTGAGAACTCTTAATAAGGTTGC
CATGAAACACCCATCGGCTGTTACAGCTTGTAACTTGGACTTGGAGAATTTGATCACTGA
TGTCAATAGAAGTATTGCTACTCTTGCTATTACTACTTTGTTGAAGACTGGAAGTGAAAG
CAGTGTTGACCGTTTGATGAAACAAATCACTTCGTTTATGTCGGAAATTTCCGATGAATT
TAAAGTGGTTGTCGTCCGTGCAATATCTGATCTGTGTCAGAAATATCCTCGCCAACATGC
TGTAATGATGAACTACCTTGCATCTATGTTAAGAGATGAGGGTGGATTTGATTACAAGAA
AGCTATTGTAGAATGTATTATTTCTATCCTGGAGGAATCAACTGAATCTAAAGAAAGTGG
TCTTGCTCATCTGTGTGAGTTTATTGAGGATTGTGAACATACTGTGCTTGCTACCAAGAT
CATTCATTTGCTTGGTAGAGAAGGCCCAAAAACTCCAAATCCATCGAAATATATTCGGTA
TATTTATAATCGAGTGATACTTGAAAACGAAGCTGTAAGAGCAGCTGCTGTTTCTGCTCT
TGCTCGTTTTGGAGCTCAGTGCGACGATCTTCTTTCCAGCATCCTCTCTCTTCTCTCAAG
ATCAATGATGGATGAAGACGATGAAGTTAGAGACCGAGCAACATTTTACTTCCACACACT
TCAACAGAAACAGAAGGCACTCAACTCAGTGTACATCTTAAATGGACTTGCTGTGTCAGT
ACCAGCATTAGAAAGATGTTTGCAACAATATTTGAAGGAACCTTCCAGTGAAAAATTTAA
CATGAAATCTGTTCCATTAGTTTCAATACCTGATGGGGAACCAAAAGCAGACTTAATTAC
TGCTGTTCGGAAAACAAAC

InterProScan

PANTHER
Coatomer_gsu (IPR017106) - T[17-604] 0.0
Gene3D
ARM-like (IPR011989) - T[29-319] 9.8E-102 - T[385-559] 1.4E-5
SUPERFAMILY
ARM-type_fold (IPR016024) - T[32-552] 4.13E-90
Pfam
Clathrin/coatomer_adapt-like_N (IPR002553) - T[32-546] 1.5E-123

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
COPG2_HUMAN 74.493 % 910 0
COPG1_HUMAN 74.411 % 901 0