- Transcript 'KH2012:KH.C8.619.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.L94.1.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.L94.1.v2.A.nonSL4-1
Possible name(s)
DEPDC1B; DEPDC4; DEPDC7
Gene model
Location
KhL94 [954 / 10,748]
Amino acid sequence
Length: 873
>KH.L94.1.v2.A.nonSL4-1
RRKILEMAARSNYSPATGGQFRATKVWKTLIEHLHENANVKRRRNVKKSYDECFTGSNAV
DVLFRFVRLHPEQFSSTGSITRDNIIRLCQAFLDNSVFEPAGGSNESNKQIKFDDSTTSL
YQFSSSTNEMNLKPLTNRQVLREIDGDLRNGLDHISISTENTKGNTPRGKNILIPTRKHG
TSRSRFPSFGGLSAQSFKGTFMTAATMHSSGSDEENATDQRAGRKLKRSSSLVGVVVKRS
SSDSNLRRGVSSASSSSDTDPDGKKKSDDLNRGGKLRLSQRLSFRKKSLSSEQETNIKPV
NQEQGTPLKKKKVKPPTPAVDPRRKSLAVRCEKPTRSLRRLLSTPSLHPKNKMTSQRPHC
DEPKNLDRIPPLPLHHRRDTNNNNGGNCIKTPTHRHLRCERNMEQTPQTTSFKSKTSNKM
RTPFKDASLTPSNGIKETPSRLKSTRRNLSSLSGLTLRMTSKRKSLGRSDASSSRITGSC
VIKNQSVANGNAKESEKDSTGGKTKNVERKLSHQEILHLRRECVRVRLLQILDLQFVDSL
ITSPTFDKKTGWDLFGGAGSHGVQYSEVVAAYNNEDSWISSALSVLQHLPNGYEILCKHA
RDTPAMKKIKLFFSISDYYKSLSQPLIDESYSEIIEALITMLETKPVPDCLEAIQLFFHL
LPEPRLFELRDLFTFLYYVVANSDVLLTPKCNNKVLVVQTFVAPVLHRVDIVPDRRISGL
FLFVMEQRHRAFRLPTSVASTMERKRKLLETGEVESPTCVPDSVFCRMITSKEYNRQRVE
FTQHHISELARALATNQSNIAPKKKKEILKKLQATHSSAYERSRGPMRVPHVHPVSPEPP
LPPKPTPSVFLRAPSSDPLSRRRNKARRNQTYL
Nucleotide sequence
Length: 3,130
>KH2012:KH.L94.1.v2.A.nonSL4-1
ATCGAAGAAAAATATTAGAAATGGCGGCACGTTCAAATTATTCTCCGGCTACAGGAGGAC
AATTTCGTGCAACGAAAGTTTGGAAAACTCTTATAGAACATCTACATGAGAACGCCAATG
TTAAACGAAGACGTAATGTAAAGAAGTCGTACGATGAATGCTTCACAGGTTCGAATGCAG
TCGATGTACTTTTCCGTTTTGTTCGTTTGCACCCCGAGCAATTCTCCAGCACTGGTTCTA
TCACGCGTGACAACATTATCCGACTGTGCCAAGCGTTTCTCGATAACAGCGTATTCGAGC
CAGCGGGGGGCAGTAATGAGTCCAACAAACAAATCAAGTTTGACGACTCAACCACTTCCT
TGTACCAATTCTCATCTTCGACGAATGAAATGAACTTAAAACCCCTCACGAACCGACAAG
TGCTAAGAGAGATAGATGGAGACTTAAGAAACGGTTTAGACCATATTTCAATCTCTACCG
AAAACACAAAAGGCAACACCCCACGTGGGAAGAACATCCTCATACCTACAAGGAAACATG
GGACTTCACGATCACGATTCCCATCGTTTGGTGGATTGTCTGCACAGTCTTTCAAAGGAA
CCTTCATGACGGCAGCTACAATGCACAGCAGTGGTTCTGATGAAGAGAACGCAACAGACC
AACGAGCAGGAAGGAAATTAAAACGCTCATCAAGTTTAGTTGGTGTGGTTGTGAAACGGT
CGTCATCTGATTCTAATCTACGCCGAGGAGTTTCATCCGCCTCTTCCTCATCGGACACCG
ATCCCGATGGTAAAAAGAAATCGGACGATTTAAACAGAGGGGGAAAGTTAAGATTAAGCC
AAAGATTGTCGTTCCGTAAAAAATCACTCAGCTCAGAGCAGGAAACCAACATTAAACCTG
TCAATCAAGAACAAGGGACGCCATTAAAGAAAAAGAAAGTTAAACCCCCAACCCCAGCAG
TTGACCCCCGTCGTAAAAGTCTCGCCGTACGATGTGAGAAACCGACCCGATCGCTTCGTC
GATTACTTTCCACCCCCTCCCTTCACCCTAAGAATAAAATGACATCACAAAGACCTCATT
GTGACGAGCCAAAGAACCTCGACAGGATACCTCCGTTGCCGTTACATCACAGACGAGACA
CCAACAACAACAATGGTGGAAATTGTATAAAAACTCCCACTCATCGACACCTAAGGTGTG
AACGAAACATGGAACAAACCCCACAAACTACAAGTTTCAAATCAAAAACATCAAATAAGA
TGAGAACCCCGTTCAAGGATGCCTCTTTAACACCATCTAATGGTATAAAGGAAACTCCTT
CTAGATTAAAATCAACGAGAAGAAACTTAAGTTCATTATCAGGTTTGACGCTTCGTATGA
CAAGCAAACGAAAATCACTCGGACGTTCTGACGCTTCATCATCTCGCATCACTGGTTCTT
GTGTGATTAAGAATCAATCGGTTGCCAACGGTAACGCAAAGGAAAGTGAGAAAGACAGCA
CGGGGGGTAAAACGAAGAATGTGGAACGAAAATTATCTCACCAAGAAATCTTACACCTAC
GTCGTGAGTGTGTTCGTGTACGTTTGCTGCAAATTCTTGACCTACAGTTTGTTGATAGTT
TGATTACCTCTCCAACTTTTGATAAGAAAACCGGTTGGGACCTGTTTGGTGGAGCTGGTT
CACATGGTGTGCAATATAGTGAGGTAGTGGCAGCTTATAACAATGAGGATAGTTGGATTT
CATCAGCGTTATCCGTGTTGCAACATTTGCCAAACGGATACGAAATACTTTGTAAACATG
CTCGTGACACGCCAGCAATGAAGAAAATTAAATTATTTTTCTCGATATCCGATTATTACA
AATCGCTGAGTCAACCACTTATTGATGAGTCGTACTCTGAAATCATTGAAGCGTTGATCA
CAATGTTAGAAACGAAACCGGTCCCTGATTGTTTGGAAGCGATCCAACTATTCTTCCATC
TTCTTCCTGAACCTCGCTTGTTTGAACTTCGGGATTTATTTACTTTCCTTTATTACGTTG
TGGCCAACTCTGATGTGTTGCTAACTCCCAAGTGTAACAACAAAGTCCTCGTCGTTCAAA
CTTTTGTTGCTCCCGTGCTCCACCGCGTGGACATTGTTCCCGATCGTCGAATTTCGGGTC
TTTTCCTCTTCGTGATGGAACAGCGCCATCGAGCGTTCAGACTTCCAACCTCTGTTGCCT
CGACGATGGAACGGAAAAGAAAGTTGTTGGAAACTGGGGAAGTTGAGAGTCCTACGTGTG
TTCCTGATTCCGTATTCTGCCGTATGATCACCAGTAAGGAATACAACAGACAGCGAGTAG
AATTCACCCAACATCATATATCAGAACTTGCGCGAGCGCTTGCTACAAACCAATCAAATA
TTGCTCCAAAGAAAAAGAAAGAAATATTGAAAAAACTCCAGGCCACACATTCTTCTGCGT
ACGAGCGCTCTCGGGGCCCAATGCGCGTCCCCCATGTGCACCCCGTGTCACCAGAGCCCC
CTCTACCCCCTAAACCGACCCCATCTGTTTTTCTACGCGCCCCGAGCTCGGACCCTCTTT
CTCGACGAAGAAATAAAGCTCGTCGTAACCAAACTTATCTCTGATTCACTGTGAAAATAT
TTTACCTTCAAAATCTAACCTTTATATAGTGGGATGCGGGAAGACGGGACGCTTTTAACT
CTATTTTGTCGTCCCATTTAGTAGTTAACAAAGAACATTTAAAGAATTATAAAACCATAT
CCTCATGACTCCCATAGACCGTTGTTAATTGTTTAAAACACGATCAAGATATTTGGATAT
CATGTGCTAAAAGTGTCCCATCTTACCCCACAGTACTTTATATACATTGTTCCTACTACT
GCCATAACATGTAACTTCATCAAATACCTTTTCCCACCCATTGGACCAAAATCATTGTCA
TTTTTTTCATTTCTTGTCGTTGTGCAAATAGATTGAGCCTAATATAGTTGTTGTCTCCCT
TGTTTAACTGTGCATTCCTTTGTACTGTGATAGATAATAATGAAATGTTTCTGGCGGATT
GCGAAAATAATATAAATAATTATGGAATCCTTGTCATTTGTAGTTGCAAATAAATCATAA
TAATGACGAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[15-124] 1.3E-26 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[24-133] 1.14E-12 |
| ProSiteProfiles |
DEP_dom (IPR000591) - T[34-125] 10.727 |
| SMART |
DEP_dom (IPR000591) - T[36-125] 3.0E-6 |
| Pfam |
DEP_dom (IPR000591) - T[39-123] 2.6E-11 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[617-685] 1.94E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|