- Transcript 'KH2012:KH.L94.1.v1.A...' >
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- Transcript 'KH2012:KH.L94.1.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.L94.1.v2.A.nonSL3-1
Possible name(s)
DEPDC1B; DEPDC4; DEPDC7
Gene model
Location
KhL94 [954 / 10,749]
Amino acid sequence
Length: 874
>KH.L94.1.v2.A.nonSL3-1
NRRKILEMAARSNYSPATGGQFRATKVWKTLIEHLHENANVKRRRNVKKSYDECFTGSNA
VDVLFRFVRLHPEQFSSTGSITRDNIIRLCQAFLDNSVFEPAGGSNESNKQIKFDDSTTS
LYQFSSSTNEMNLKPLTNRQVLREIDGDLRNGLDHISISTENTKGNTPRGKNILIPTRKH
GTSRSRFPSFGGLSAQSFKGTFMTAATMHSSGSDEENATDQRAGRKLKRSSSLVGVVVKR
SSSDSNLRRGVSSASSSSDTDPDGKKKSDDLNRGGKLRLSQRLSFRKKSLSSEQETNIKP
VNQEQGTPLKKKKVKPPTPAVDPRRKSLAVRCEKPTRSLRRLLSTPSLHPKNKMTSQRPH
CDEPKNLDRIPPLPLHHRRDTNNNNGGNCIKTPTHRHLRCERNMEQTPQTTSFKSKTSNK
MRTPFKDASLTPSNGIKETPSRLKSTRRNLSSLSGLTLRMTSKRKSLGRSDASSSRITGS
CVIKNQSVANGNAKESEKDSTGGKTKNVERKLSHQEILHLRRECVRVRLLQILDLQFVDS
LITSPTFDKKTGWDLFGGAGSHGVQYSEVVAAYNNEDSWISSALSVLQHLPNGYEILCKH
ARDTPAMKKIKLFFSISDYYKSLSQPLIDESYSEIIEALITMLETKPVPDCLEAIQLFFH
LLPEPRLFELRDLFTFLYYVVANSDVLLTPKCNNKVLVVQTFVAPVLHRVDIVPDRRISG
LFLFVMEQRHRAFRLPTSVASTMERKRKLLETGEVESPTCVPDSVFCRMITSKEYNRQRV
EFTQHHISELARALATNQSNIAPKKKKEILKKLQATHSSAYERSRGPMRVPHVHPVSPEP
PLPPKPTPSVFLRAPSSDPLSRRRNKARRNQTYL
Nucleotide sequence
Length: 3,131
>KH2012:KH.L94.1.v2.A.nonSL3-1
AATCGAAGAAAAATATTAGAAATGGCGGCACGTTCAAATTATTCTCCGGCTACAGGAGGA
CAATTTCGTGCAACGAAAGTTTGGAAAACTCTTATAGAACATCTACATGAGAACGCCAAT
GTTAAACGAAGACGTAATGTAAAGAAGTCGTACGATGAATGCTTCACAGGTTCGAATGCA
GTCGATGTACTTTTCCGTTTTGTTCGTTTGCACCCCGAGCAATTCTCCAGCACTGGTTCT
ATCACGCGTGACAACATTATCCGACTGTGCCAAGCGTTTCTCGATAACAGCGTATTCGAG
CCAGCGGGGGGCAGTAATGAGTCCAACAAACAAATCAAGTTTGACGACTCAACCACTTCC
TTGTACCAATTCTCATCTTCGACGAATGAAATGAACTTAAAACCCCTCACGAACCGACAA
GTGCTAAGAGAGATAGATGGAGACTTAAGAAACGGTTTAGACCATATTTCAATCTCTACC
GAAAACACAAAAGGCAACACCCCACGTGGGAAGAACATCCTCATACCTACAAGGAAACAT
GGGACTTCACGATCACGATTCCCATCGTTTGGTGGATTGTCTGCACAGTCTTTCAAAGGA
ACCTTCATGACGGCAGCTACAATGCACAGCAGTGGTTCTGATGAAGAGAACGCAACAGAC
CAACGAGCAGGAAGGAAATTAAAACGCTCATCAAGTTTAGTTGGTGTGGTTGTGAAACGG
TCGTCATCTGATTCTAATCTACGCCGAGGAGTTTCATCCGCCTCTTCCTCATCGGACACC
GATCCCGATGGTAAAAAGAAATCGGACGATTTAAACAGAGGGGGAAAGTTAAGATTAAGC
CAAAGATTGTCGTTCCGTAAAAAATCACTCAGCTCAGAGCAGGAAACCAACATTAAACCT
GTCAATCAAGAACAAGGGACGCCATTAAAGAAAAAGAAAGTTAAACCCCCAACCCCAGCA
GTTGACCCCCGTCGTAAAAGTCTCGCCGTACGATGTGAGAAACCGACCCGATCGCTTCGT
CGATTACTTTCCACCCCCTCCCTTCACCCTAAGAATAAAATGACATCACAAAGACCTCAT
TGTGACGAGCCAAAGAACCTCGACAGGATACCTCCGTTGCCGTTACATCACAGACGAGAC
ACCAACAACAACAATGGTGGAAATTGTATAAAAACTCCCACTCATCGACACCTAAGGTGT
GAACGAAACATGGAACAAACCCCACAAACTACAAGTTTCAAATCAAAAACATCAAATAAG
ATGAGAACCCCGTTCAAGGATGCCTCTTTAACACCATCTAATGGTATAAAGGAAACTCCT
TCTAGATTAAAATCAACGAGAAGAAACTTAAGTTCATTATCAGGTTTGACGCTTCGTATG
ACAAGCAAACGAAAATCACTCGGACGTTCTGACGCTTCATCATCTCGCATCACTGGTTCT
TGTGTGATTAAGAATCAATCGGTTGCCAACGGTAACGCAAAGGAAAGTGAGAAAGACAGC
ACGGGGGGTAAAACGAAGAATGTGGAACGAAAATTATCTCACCAAGAAATCTTACACCTA
CGTCGTGAGTGTGTTCGTGTACGTTTGCTGCAAATTCTTGACCTACAGTTTGTTGATAGT
TTGATTACCTCTCCAACTTTTGATAAGAAAACCGGTTGGGACCTGTTTGGTGGAGCTGGT
TCACATGGTGTGCAATATAGTGAGGTAGTGGCAGCTTATAACAATGAGGATAGTTGGATT
TCATCAGCGTTATCCGTGTTGCAACATTTGCCAAACGGATACGAAATACTTTGTAAACAT
GCTCGTGACACGCCAGCAATGAAGAAAATTAAATTATTTTTCTCGATATCCGATTATTAC
AAATCGCTGAGTCAACCACTTATTGATGAGTCGTACTCTGAAATCATTGAAGCGTTGATC
ACAATGTTAGAAACGAAACCGGTCCCTGATTGTTTGGAAGCGATCCAACTATTCTTCCAT
CTTCTTCCTGAACCTCGCTTGTTTGAACTTCGGGATTTATTTACTTTCCTTTATTACGTT
GTGGCCAACTCTGATGTGTTGCTAACTCCCAAGTGTAACAACAAAGTCCTCGTCGTTCAA
ACTTTTGTTGCTCCCGTGCTCCACCGCGTGGACATTGTTCCCGATCGTCGAATTTCGGGT
CTTTTCCTCTTCGTGATGGAACAGCGCCATCGAGCGTTCAGACTTCCAACCTCTGTTGCC
TCGACGATGGAACGGAAAAGAAAGTTGTTGGAAACTGGGGAAGTTGAGAGTCCTACGTGT
GTTCCTGATTCCGTATTCTGCCGTATGATCACCAGTAAGGAATACAACAGACAGCGAGTA
GAATTCACCCAACATCATATATCAGAACTTGCGCGAGCGCTTGCTACAAACCAATCAAAT
ATTGCTCCAAAGAAAAAGAAAGAAATATTGAAAAAACTCCAGGCCACACATTCTTCTGCG
TACGAGCGCTCTCGGGGCCCAATGCGCGTCCCCCATGTGCACCCCGTGTCACCAGAGCCC
CCTCTACCCCCTAAACCGACCCCATCTGTTTTTCTACGCGCCCCGAGCTCGGACCCTCTT
TCTCGACGAAGAAATAAAGCTCGTCGTAACCAAACTTATCTCTGATTCACTGTGAAAATA
TTTTACCTTCAAAATCTAACCTTTATATAGTGGGATGCGGGAAGACGGGACGCTTTTAAC
TCTATTTTGTCGTCCCATTTAGTAGTTAACAAAGAACATTTAAAGAATTATAAAACCATA
TCCTCATGACTCCCATAGACCGTTGTTAATTGTTTAAAACACGATCAAGATATTTGGATA
TCATGTGCTAAAAGTGTCCCATCTTACCCCACAGTACTTTATATACATTGTTCCTACTAC
TGCCATAACATGTAACTTCATCAAATACCTTTTCCCACCCATTGGACCAAAATCATTGTC
ATTTTTTTCATTTCTTGTCGTTGTGCAAATAGATTGAGCCTAATATAGTTGTTGTCTCCC
TTGTTTAACTGTGCATTCCTTTGTACTGTGATAGATAATAATGAAATGTTTCTGGCGGAT
TGCGAAAATAATATAAATAATTATGGAATCCTTGTCATTTGTAGTTGCAAATAAATCATA
ATAATGACGAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[16-125] 1.3E-26 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[25-134] 1.14E-12 |
| ProSiteProfiles |
DEP_dom (IPR000591) - T[35-126] 10.727 |
| SMART |
DEP_dom (IPR000591) - T[37-126] 3.0E-6 |
| Pfam |
DEP_dom (IPR000591) - T[40-124] 2.6E-11 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[618-686] 1.94E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|