- Clone 'cien158100' >
- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C3.87.v3.C...' >
- Transcript 'KH2012:KH.L94.1.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L94.1.v1.A.nonSL4-1
Possible name(s)
DEPDC1B; DEPDC4; DEPDC7
Gene model
Location
KhL94 [954 / 10,748]
Amino acid sequence
Length: 696
>KH.L94.1.v1.A.nonSL4-1
RRKILEMAARSNYSPATGGQFRATKVWKTLIEHLHENANVKRRRNVKKSYDECFTGSNAV
DVLFRFVRLHPEQFSSTGSITRDNIIRLCQAFLDNSVFEPAGGSNESNKQIKFDDSTTSL
YQFSSSTNEMNLKPLTNRQVLREIDGDLRNGLDHISISTENTKGNTPRGKNILIPTRKHG
TSRSRFPSFGGLSAQSFKGTFMTAATMHSSGSDEENATDQRAGRKLKRSSSLVGVVVKRS
SSDSNLRRGVSSASSSSDTDPDGKKKSDDLNRGGKLRLSQRLSFRKKSLRRSDASSSRIT
GSCVIKNQSVANGNAKESEKDSTGGKTKNVERKLSHQEILHLRRECVRVRLLQILDLQFV
DSLITSPTFDKKTGWDLFGGAGSHGVQYSEVVAAYNNEDSWISSALSVLQHLPNGYEILC
KHARDTPAMKKIKLFFSISDYYKSLSQPLIDESYSEIIEALITMLETKPVPDCLEAIQLF
FHLLPEPRLFELRDLFTFLYYVVANSDVLLTPKCNNKVLVVQTFVAPVLHRVDIVPDRRI
SGLFLFVMEQRHRAFRLPTSVASTMERKRKLLETGEVESPTCVPDSVFCRMITSKEYNRQ
RVEFTQHHISELARALATNQSNIAPKKKKEILKKLQATHSSAYERSRGPMRVPHVHPVSP
EPPLPPKPTPSVFLRAPSSDPLSRRRNKARRNQTYL
Nucleotide sequence
Length: 2,599
>KH2012:KH.L94.1.v1.A.nonSL4-1
ATCGAAGAAAAATATTAGAAATGGCGGCACGTTCAAATTATTCTCCGGCTACAGGAGGAC
AATTTCGTGCAACGAAAGTTTGGAAAACTCTTATAGAACATCTACATGAGAACGCCAATG
TTAAACGAAGACGTAATGTAAAGAAGTCGTACGATGAATGCTTCACAGGTTCGAATGCAG
TCGATGTACTTTTCCGTTTTGTTCGTTTGCACCCCGAGCAATTCTCCAGCACTGGTTCTA
TCACGCGTGACAACATTATCCGACTGTGCCAAGCGTTTCTCGATAACAGCGTATTCGAGC
CAGCGGGGGGCAGTAATGAGTCCAACAAACAAATCAAGTTTGACGACTCAACCACTTCCT
TGTACCAATTCTCATCTTCGACGAATGAAATGAACTTAAAACCCCTCACGAACCGACAAG
TGCTAAGAGAGATAGATGGAGACTTAAGAAACGGTTTAGACCATATTTCAATCTCTACCG
AAAACACAAAAGGCAACACCCCACGTGGGAAGAACATCCTCATACCTACAAGGAAACATG
GGACTTCACGATCACGATTCCCATCGTTTGGTGGATTGTCTGCACAGTCTTTCAAAGGAA
CCTTCATGACGGCAGCTACAATGCACAGCAGTGGTTCTGATGAAGAGAACGCAACAGACC
AACGAGCAGGAAGGAAATTAAAACGCTCATCAAGTTTAGTTGGTGTGGTTGTGAAACGGT
CGTCATCTGATTCTAATCTACGCCGAGGAGTTTCATCCGCCTCTTCCTCATCGGACACCG
ATCCCGATGGTAAAAAGAAATCGGACGATTTAAACAGAGGGGGAAAGTTAAGATTAAGCC
AAAGATTGTCGTTCCGTAAAAAATCACTCAGACGTTCTGACGCTTCATCATCTCGCATCA
CTGGTTCTTGTGTGATTAAGAATCAATCGGTTGCCAACGGTAACGCAAAGGAAAGTGAGA
AAGACAGCACGGGGGGTAAAACGAAGAATGTGGAACGAAAATTATCTCACCAAGAAATCT
TACACCTACGTCGTGAGTGTGTTCGTGTACGTTTGCTGCAAATTCTTGACCTACAGTTTG
TTGATAGTTTGATTACCTCTCCAACTTTTGATAAGAAAACCGGTTGGGACCTGTTTGGTG
GAGCTGGTTCACATGGTGTGCAATATAGTGAGGTAGTGGCAGCTTATAACAATGAGGATA
GTTGGATTTCATCAGCGTTATCCGTGTTGCAACATTTGCCAAACGGATACGAAATACTTT
GTAAACATGCTCGTGACACGCCAGCAATGAAGAAAATTAAATTATTTTTCTCGATATCCG
ATTATTACAAATCGCTGAGTCAACCACTTATTGATGAGTCGTACTCTGAAATCATTGAAG
CGTTGATCACAATGTTAGAAACGAAACCGGTCCCTGATTGTTTGGAAGCGATCCAACTAT
TCTTCCATCTTCTTCCTGAACCTCGCTTGTTTGAACTTCGGGATTTATTTACTTTCCTTT
ATTACGTTGTGGCCAACTCTGATGTGTTGCTAACTCCCAAGTGTAACAACAAAGTCCTCG
TCGTTCAAACTTTTGTTGCTCCCGTGCTCCACCGCGTGGACATTGTTCCCGATCGTCGAA
TTTCGGGTCTTTTCCTCTTCGTGATGGAACAGCGCCATCGAGCGTTCAGACTTCCAACCT
CTGTTGCCTCGACGATGGAACGGAAAAGAAAGTTGTTGGAAACTGGGGAAGTTGAGAGTC
CTACGTGTGTTCCTGATTCCGTATTCTGCCGTATGATCACCAGTAAGGAATACAACAGAC
AGCGAGTAGAATTCACCCAACATCATATATCAGAACTTGCGCGAGCGCTTGCTACAAACC
AATCAAATATTGCTCCAAAGAAAAAGAAAGAAATATTGAAAAAACTCCAGGCCACACATT
CTTCTGCGTACGAGCGCTCTCGGGGCCCAATGCGCGTCCCCCATGTGCACCCCGTGTCAC
CAGAGCCCCCTCTACCCCCTAAACCGACCCCATCTGTTTTTCTACGCGCCCCGAGCTCGG
ACCCTCTTTCTCGACGAAGAAATAAAGCTCGTCGTAACCAAACTTATCTCTGATTCACTG
TGAAAATATTTTACCTTCAAAATCTAACCTTTATATAGTGGGATGCGGGAAGACGGGACG
CTTTTAACTCTATTTTGTCGTCCCATTTAGTAGTTAACAAAGAACATTTAAAGAATTATA
AAACCATATCCTCATGACTCCCATAGACCGTTGTTAATTGTTTAAAACACGATCAAGATA
TTTGGATATCATGTGCTAAAAGTGTCCCATCTTACCCCACAGTACTTTATATACATTGTT
CCTACTACTGCCATAACATGTAACTTCATCAAATACCTTTTCCCACCCATTGGACCAAAA
TCATTGTCATTTTTTTCATTTCTTGTCGTTGTGCAAATAGATTGAGCCTAATATAGTTGT
TGTCTCCCTTGTTTAACTGTGCATTCCTTTGTACTGTGATAGATAATAATGAAATGTTTC
TGGCGGATTGCGAAAATAATATAAATAATTATGGAATCCTTGTCATTTGTAGTTGCAAAT
AAATCATAATAATGACGAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[15-124] 9.2E-27 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[24-133] 7.62E-13 |
| ProSiteProfiles |
DEP_dom (IPR000591) - T[34-125] 10.727 |
| SMART |
DEP_dom (IPR000591) - T[36-125] 3.0E-6 |
| Pfam |
DEP_dom (IPR000591) - T[39-123] 1.9E-11 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[440-508] 1.33E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|