- Transcript 'KH2012:KH.L94.1.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L94.1.v1.A.nonSL3-1
Possible name(s)
DEPDC1B; DEPDC4; DEPDC7
Gene model
Location
KhL94 [954 / 10,749]
Amino acid sequence
Length: 697
>KH.L94.1.v1.A.nonSL3-1
NRRKILEMAARSNYSPATGGQFRATKVWKTLIEHLHENANVKRRRNVKKSYDECFTGSNA
VDVLFRFVRLHPEQFSSTGSITRDNIIRLCQAFLDNSVFEPAGGSNESNKQIKFDDSTTS
LYQFSSSTNEMNLKPLTNRQVLREIDGDLRNGLDHISISTENTKGNTPRGKNILIPTRKH
GTSRSRFPSFGGLSAQSFKGTFMTAATMHSSGSDEENATDQRAGRKLKRSSSLVGVVVKR
SSSDSNLRRGVSSASSSSDTDPDGKKKSDDLNRGGKLRLSQRLSFRKKSLRRSDASSSRI
TGSCVIKNQSVANGNAKESEKDSTGGKTKNVERKLSHQEILHLRRECVRVRLLQILDLQF
VDSLITSPTFDKKTGWDLFGGAGSHGVQYSEVVAAYNNEDSWISSALSVLQHLPNGYEIL
CKHARDTPAMKKIKLFFSISDYYKSLSQPLIDESYSEIIEALITMLETKPVPDCLEAIQL
FFHLLPEPRLFELRDLFTFLYYVVANSDVLLTPKCNNKVLVVQTFVAPVLHRVDIVPDRR
ISGLFLFVMEQRHRAFRLPTSVASTMERKRKLLETGEVESPTCVPDSVFCRMITSKEYNR
QRVEFTQHHISELARALATNQSNIAPKKKKEILKKLQATHSSAYERSRGPMRVPHVHPVS
PEPPLPPKPTPSVFLRAPSSDPLSRRRNKARRNQTYL
Nucleotide sequence
Length: 2,600
>KH2012:KH.L94.1.v1.A.nonSL3-1
AATCGAAGAAAAATATTAGAAATGGCGGCACGTTCAAATTATTCTCCGGCTACAGGAGGA
CAATTTCGTGCAACGAAAGTTTGGAAAACTCTTATAGAACATCTACATGAGAACGCCAAT
GTTAAACGAAGACGTAATGTAAAGAAGTCGTACGATGAATGCTTCACAGGTTCGAATGCA
GTCGATGTACTTTTCCGTTTTGTTCGTTTGCACCCCGAGCAATTCTCCAGCACTGGTTCT
ATCACGCGTGACAACATTATCCGACTGTGCCAAGCGTTTCTCGATAACAGCGTATTCGAG
CCAGCGGGGGGCAGTAATGAGTCCAACAAACAAATCAAGTTTGACGACTCAACCACTTCC
TTGTACCAATTCTCATCTTCGACGAATGAAATGAACTTAAAACCCCTCACGAACCGACAA
GTGCTAAGAGAGATAGATGGAGACTTAAGAAACGGTTTAGACCATATTTCAATCTCTACC
GAAAACACAAAAGGCAACACCCCACGTGGGAAGAACATCCTCATACCTACAAGGAAACAT
GGGACTTCACGATCACGATTCCCATCGTTTGGTGGATTGTCTGCACAGTCTTTCAAAGGA
ACCTTCATGACGGCAGCTACAATGCACAGCAGTGGTTCTGATGAAGAGAACGCAACAGAC
CAACGAGCAGGAAGGAAATTAAAACGCTCATCAAGTTTAGTTGGTGTGGTTGTGAAACGG
TCGTCATCTGATTCTAATCTACGCCGAGGAGTTTCATCCGCCTCTTCCTCATCGGACACC
GATCCCGATGGTAAAAAGAAATCGGACGATTTAAACAGAGGGGGAAAGTTAAGATTAAGC
CAAAGATTGTCGTTCCGTAAAAAATCACTCAGACGTTCTGACGCTTCATCATCTCGCATC
ACTGGTTCTTGTGTGATTAAGAATCAATCGGTTGCCAACGGTAACGCAAAGGAAAGTGAG
AAAGACAGCACGGGGGGTAAAACGAAGAATGTGGAACGAAAATTATCTCACCAAGAAATC
TTACACCTACGTCGTGAGTGTGTTCGTGTACGTTTGCTGCAAATTCTTGACCTACAGTTT
GTTGATAGTTTGATTACCTCTCCAACTTTTGATAAGAAAACCGGTTGGGACCTGTTTGGT
GGAGCTGGTTCACATGGTGTGCAATATAGTGAGGTAGTGGCAGCTTATAACAATGAGGAT
AGTTGGATTTCATCAGCGTTATCCGTGTTGCAACATTTGCCAAACGGATACGAAATACTT
TGTAAACATGCTCGTGACACGCCAGCAATGAAGAAAATTAAATTATTTTTCTCGATATCC
GATTATTACAAATCGCTGAGTCAACCACTTATTGATGAGTCGTACTCTGAAATCATTGAA
GCGTTGATCACAATGTTAGAAACGAAACCGGTCCCTGATTGTTTGGAAGCGATCCAACTA
TTCTTCCATCTTCTTCCTGAACCTCGCTTGTTTGAACTTCGGGATTTATTTACTTTCCTT
TATTACGTTGTGGCCAACTCTGATGTGTTGCTAACTCCCAAGTGTAACAACAAAGTCCTC
GTCGTTCAAACTTTTGTTGCTCCCGTGCTCCACCGCGTGGACATTGTTCCCGATCGTCGA
ATTTCGGGTCTTTTCCTCTTCGTGATGGAACAGCGCCATCGAGCGTTCAGACTTCCAACC
TCTGTTGCCTCGACGATGGAACGGAAAAGAAAGTTGTTGGAAACTGGGGAAGTTGAGAGT
CCTACGTGTGTTCCTGATTCCGTATTCTGCCGTATGATCACCAGTAAGGAATACAACAGA
CAGCGAGTAGAATTCACCCAACATCATATATCAGAACTTGCGCGAGCGCTTGCTACAAAC
CAATCAAATATTGCTCCAAAGAAAAAGAAAGAAATATTGAAAAAACTCCAGGCCACACAT
TCTTCTGCGTACGAGCGCTCTCGGGGCCCAATGCGCGTCCCCCATGTGCACCCCGTGTCA
CCAGAGCCCCCTCTACCCCCTAAACCGACCCCATCTGTTTTTCTACGCGCCCCGAGCTCG
GACCCTCTTTCTCGACGAAGAAATAAAGCTCGTCGTAACCAAACTTATCTCTGATTCACT
GTGAAAATATTTTACCTTCAAAATCTAACCTTTATATAGTGGGATGCGGGAAGACGGGAC
GCTTTTAACTCTATTTTGTCGTCCCATTTAGTAGTTAACAAAGAACATTTAAAGAATTAT
AAAACCATATCCTCATGACTCCCATAGACCGTTGTTAATTGTTTAAAACACGATCAAGAT
ATTTGGATATCATGTGCTAAAAGTGTCCCATCTTACCCCACAGTACTTTATATACATTGT
TCCTACTACTGCCATAACATGTAACTTCATCAAATACCTTTTCCCACCCATTGGACCAAA
ATCATTGTCATTTTTTTCATTTCTTGTCGTTGTGCAAATAGATTGAGCCTAATATAGTTG
TTGTCTCCCTTGTTTAACTGTGCATTCCTTTGTACTGTGATAGATAATAATGAAATGTTT
CTGGCGGATTGCGAAAATAATATAAATAATTATGGAATCCTTGTCATTTGTAGTTGCAAA
TAAATCATAATAATGACGAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[16-125] 9.2E-27 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[25-134] 7.62E-13 |
| ProSiteProfiles |
DEP_dom (IPR000591) - T[35-126] 10.727 |
| SMART |
DEP_dom (IPR000591) - T[37-126] 3.0E-6 |
| Pfam |
DEP_dom (IPR000591) - T[40-124] 1.9E-11 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[441-509] 1.33E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|