- Clone 'ma191m12' >
- Transcript 'KH2012:KH.L9.13.v1.B...'
Transcript Model
Transcript Id
KH2012:KH.L9.13.v1.B.ND1-1
Possible name(s)
ASCL1; ASCL3; ASCL5
Gene model
Location
KhL9 [186,756 / 189,191]
Amino acid sequence
Length: 300
>KH.L9.13.v1.B.ND1-1
TKMATGSDEPRSNAIISMPFNNRWKEGSLGENNPNFRVEIRSGAGGKNPTSVARRNARER
RRIKNVNSAFDELRQHVPNGERNRKKISKVDTLQSAIEYIKALEELVRNRKSKSDVINKE
NATTSSNAMTSQNDDIMFVKEAEVTSQKKKDSKSPVALTESMLKAFDVMLQKCTSQSKTK
EDDDVIRMDSTSDSGFSEILCDVTSGGESMTNLPPNIPESPILQSNNCDVSFESLQGFPP
SYNPQRFTPYPTYMGEWSHMPPTPGEFPPVDQITPTLQLPVGFSNDFPANDADWLNHNHF
Nucleotide sequence
Length: 1,741
>KH2012:KH.L9.13.v1.B.ND1-1
AATAGGTCCGTGTCGAATTGAAATTCAAGATTCTTAGGTATTGTTACGTCACATATGTCG
AGAACAAGCGTATCATTTGATCACGTGGTAATCGAACCCTCTGTGACGTCACAAGTGATA
TTCAACGTGGGCGGTCAAATGTTCGAGAATCGAAATAGTATCAACTTTTAATCCGCTTGG
AGGCCAGATTAGTGACGTTTGTTTTAGAACGCTGTAAACGCGATTGACGCGACGATGATC
CTTTTACTCGGGATTGATGGAACAACCGCTAGCGTCGCTGCCGGGACGAATCGCTTTTAC
GCGAATTAATATTCGACAAAATATCGATTTGTTTAAGCGCGAACAATCGCTATTGTGACG
AAGCACGAAAATCGCTGCGACCGCGGCAAATATTTCCCTCTGTGACGTCACATAGACCTC
TATAAGCGAATTTTAGGCGAAAATAATTTTTGTTGAAATTGAATTAAAACCCGATGTCAT
GCGTGTGGATTGCACCTAAGGGCACCTGGCAGGCGTATGCGGTCACGTGGGTGACACGTC
ACGTGATTATGACGTTTAATATCACGATGAAATGATGTTTCGATGTTGTATATTCGACTT
TCAACTGTTTTGTTAGTTTTGAACAAAAATGGCGACCGGAAGTGACGAACCGCGGTCGAA
CGCGATAATATCGATGCCGTTCAACAACAGATGGAAGGAGGGAAGTTTGGGGGAAAATAA
CCCAAACTTCCGAGTTGAGATTCGGAGTGGGGCTGGGGGGAAAAACCCCACCAGTGTAGC
GAGGCGAAATGCACGGGAACGACGAAGGATTAAAAACGTGAATTCAGCATTCGACGAATT
GAGACAACATGTGCCTAATGGTGAAAGAAATCGGAAGAAGATTAGTAAGGTGGACACGTT
ACAATCTGCTATCGAATATATTAAAGCATTAGAAGAACTCGTGCGTAACCGGAAGTCCAA
AAGTGACGTCATCAATAAAGAGAACGCTACAACGTCATCGAACGCTATGACGTCACAAAA
CGATGACATCATGTTTGTAAAGGAAGCTGAAGTGACGTCACAGAAGAAAAAAGATTCGAA
ATCTCCGGTAGCGTTAACGGAGTCTATGCTAAAGGCGTTTGACGTCATGCTGCAAAAATG
TACGTCACAATCGAAGACAAAAGAAGATGATGACGTCATAAGGATGGATTCGACGAGCGA
CAGCGGTTTCTCCGAGATCCTCTGTGATGTCACAAGCGGCGGGGAATCGATGACGAATTT
GCCGCCAAATATTCCAGAATCCCCGATCTTACAATCGAACAATTGTGACGTCAGTTTTGA
ATCGTTGCAGGGGTTTCCCCCAAGTTACAACCCCCAACGTTTTACCCCTTACCCCACGTA
CATGGGTGAGTGGTCCCACATGCCCCCTACCCCAGGAGAATTCCCCCCAGTAGACCAAAT
TACCCCAACCCTTCAACTTCCGGTTGGATTTTCAAACGATTTTCCCGCCAATGACGCTGA
TTGGTTAAACCACAATCATTTCTGATCACCACGTGACCTTAACCGACCAATCATAGCCCT
TCACTGCCTTGCTGCTTTATGACATCATCAATCCGCTTTGTGACTTAATAATTTTTATTC
GAAATAAACTTCCATTACCGCGCGCGTCTATTTGCAACAATGGATAAAAAAACAAACAAA
GCGACTATTTGTCCCATAATTACGTCATAATGGTGAAATATCAATAAACAATCGAACCGC
G
| PANTHER |
MASH1/Ascl1a-like (IPR015660) - T[48-226] 1.2E-28 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[50-103] 16.367 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[53-109] 5.8E-21 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[54-122] 2.09E-17 |
| Pfam |
bHLH_dom (IPR011598) - T[55-104] 1.4E-17 |
| SMART |
bHLH_dom (IPR011598) - T[56-109] 2.7E-17 |
| CDD |
bHLH_dom (IPR011598) - T[64-108] 1.40863E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|