- Transcript 'KH2012:KH.L90.10.v1....'
Transcript Model
Transcript Id
KH2012:KH.L90.10.v1.A.ND1-1
Possible name(s)
SLC6A1; SLC6A12; SLC6A13
Gene model
Location
KhL90 [31,922 / 38,339]
Amino acid sequence
Length: 423
>KH.L90.10.v1.A.ND1-1
NITNETVFLQDSLPQVQFWRNYVLRLPNGNPYNKNFNWQMLLASLAAFVTIFAVTVRGVK
SSGKVVYFTTTFPYVILCVLFVRGVTLEGASNGMRKLFVPDFERLLSPQVWVEAASQAMY
SFGVCYTGLTAFGSFNPRRNNYFKQAVFMIPIGCLTSIFMGLITFSFLGHIAHVNKVEIT
SVISSGPGLIFQVLPYGLSLLPVPQLWSILFFFMFYLVCIDSAFSEFEGMMVIIGDAFPN
AVSNSKNRAMTGTAFGVSLYLLSLMLLHQNGLYIFEILNYYGGAGICLLWLALCESVAVG
WFWNADRFAIDFKYMTDTNLSLYFKFCYKYVIPTATSAILILYCIKWEPLKVGDYVYPWW
ANGIGWILSLSSILWIPGVACYVMARGEGTLSQRFKNGIKWDLEEKYNPGSDEDKEERIE
LKI
Nucleotide sequence
Length: 1,696
>KH2012:KH.L90.10.v1.A.ND1-1
AATATCACAAACGAGACCGTGTTTCTACAAGATTCGTTGCCACAAGTACAGTTCTGGAGG
AATTACGTCTTGAGACTTCCCAACGGCAACCCGTACAACAAAAATTTCAATTGGCAAATG
CTCTTGGCGTCTTTGGCAGCATTTGTTACTATTTTTGCTGTAACTGTAAGAGGAGTCAAG
TCGAGTGGAAAGGTTGTTTATTTCACCACCACATTCCCGTATGTTATATTATGTGTGCTT
TTTGTGAGGGGAGTTACATTAGAAGGAGCCTCCAATGGAATGAGGAAACTTTTTGTTCCA
GATTTTGAGCGCCTTCTATCTCCCCAGGTTTGGGTTGAAGCTGCCTCACAAGCTATGTAT
TCATTTGGTGTATGTTATACTGGTTTAACAGCATTTGGAAGTTTCAATCCTCGGCGCAAC
AACTATTTCAAGCAAGCAGTATTCATGATACCAATTGGATGTCTTACTTCAATATTCATG
GGGTTAATAACGTTTAGTTTCCTTGGTCATATTGCGCACGTTAATAAAGTTGAAATTACG
AGCGTCATCAGCTCAGGCCCAGGACTTATTTTTCAAGTTTTGCCGTATGGGTTAAGTTTG
TTGCCTGTTCCCCAACTCTGGTCAATTTTGTTCTTTTTCATGTTTTATCTCGTTTGCATT
GACAGCGCGTTCTCTGAGTTTGAAGGCATGATGGTGATCATAGGCGATGCTTTCCCTAAC
GCTGTTTCAAACTCGAAGAATCGTGCTATGACTGGAACAGCATTTGGGGTTTCTCTTTAC
CTTTTAAGCCTCATGCTTCTGCATCAGAATGGATTATACATATTTGAGATACTCAACTAT
TACGGAGGGGCTGGGATATGTCTTCTGTGGTTAGCACTTTGTGAGTCTGTTGCTGTTGGT
TGGTTTTGGAATGCTGATAGATTTGCCATCGACTTTAAATACATGACCGACACCAATCTC
TCCCTATATTTCAAGTTCTGCTACAAATACGTGATACCAACTGCAACATCAGCAATTCTG
ATATTATATTGTATTAAATGGGAGCCACTTAAAGTTGGTGATTATGTTTATCCATGGTGG
GCTAATGGTATTGGTTGGATACTTTCTCTATCTTCAATTTTATGGATACCAGGAGTAGCT
TGTTATGTAATGGCTCGTGGTGAAGGTACTTTATCACAAAGATTTAAAAATGGCATTAAA
TGGGATTTGGAAGAGAAGTATAATCCTGGCTCAGATGAGGATAAAGAAGAAAGGATTGAA
TTAAAAATCTAAAACATTTGGTTCGAACACAGTTTGTCTCTGTGCTTTGGAACATAACAT
ACAAAAATCAAGTCCAACCAATTGTATGATATAAAAAATCTATATTTCGCCTAAATGACA
TCGTCAGTCTCTTATTCCAATAGAACTTATTCCAATAGAAAAGAATTAAATAACTTGCAT
GTTTTTGCATGAGCTGCATGAAAACAACATTTTATGCTAAATGTTTCATGCCATATAAAT
TTATTTATCTATATTTCAATTTTTTTATATTCAAATATAAGAGCAATTATATTATATATA
TTTTATATTAATTTATATTAAATAATAATTTATATTAAATTAATAACCTCGTCCCTTGAA
TAATATTGCCAAAGTATTTTTCTTTAGTTCATATATTTGAGAATGTTCATTAAAGATTAC
AGTTATTCATAATTAG
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[1-389] 55.494 |
| Pfam |
Na/ntran_symport (IPR000175) - T[10-384] 4.9E-99 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[12-384] 5.89E-90 |
| PANTHER |
Na/ntran_symport (IPR000175) - T[14-396] 2.2E-142 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[65-82] 9.3E-27 - T[147-167] 9.3E-27 - T[201-220] 9.3E-27 - T[285-305] 9.3E-27 - T[325-345] 9.3E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| S6A13_HUMAN | 34.307 % | 272 | 1.75E-85 |
| S6A11_HUMAN | 36.25 % | 270 | 1.95E-84 |
| SC6A1_HUMAN | 33.252 % | 269 | 2.67E-84 |
