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TRANSCRIPT CARD

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  1. Region 'REG00000087' > 
  2. Region 'REG00001516' > 
  3. Region 'REG00000321' > 
  4. Transcript 'Haaura.CG.MTP2014.S9...' > 
  5. Transcript 'KH2012:KH.L87.32.v1....'

Transcript Model

Transcript Id

KH2012:KH.L87.32.v1.R.ND2-1

Possible name(s)

CACNA1C; HVCN1; TMEM266

Gene model

KH2012:KH.L87.32

Location

KhL87 [43,772 / 47,134]

Sequences

Amino acid sequence

Length: 351

>KH.L87.32.v1.R.ND2-1
FARTIILIIMEGDNCNKSRHKSHNMINPNYASVRCTQPLPSVIQLRSRNKMIGITEDPSS
DSEPVSSNQPLLLTNLSYEVHTFNDNNNHERPAPQEQSTQNTMISMQSEQKSDRFTASNL
GMFQYMKFEIGEDGDDHEEEAILTNREKLRHILHSKPIHVAIIVLVVLDSFLVVGELLID
LKVIIVPHGNPAPEILHGFSLSILSIFMVEIALKIIADHRHFIHHKVEVLDAVVVVISFG
VDIALIFVGESEALAAIGLLVILRLWRVFRIINGIIVTVKTKADDRVHEIKKKNSELELQ
IHNLEEKLSQKEQDMSRLHEILRCNNIDIPPTVPLTTSVQIHSTTTASADV

Nucleotide sequence

Length: 1,240

>KH2012:KH.L87.32.v1.R.ND2-1
AACAGGGAGAGACAAGTCGTATTTGTTTAGTATCTGTGGCATCAATCGTAGCCTAATAAT
TTATGAAGGTGAGAAAATAATTTGCAAGAACAATTATTCTTATAATCATGGAAGGCGATA
ATTGCAATAAATCTCGTCATAAAAGCCACAACATGATTAACCCTAATTATGCAAGTGTAC
GATGTACACAACCTCTTCCATCTGTAATCCAACTTCGATCTCGAAACAAAATGATTGGCA
TCACTGAAGACCCTTCTTCAGACTCTGAACCCGTATCCTCCAACCAGCCATTATTGCTCA
CAAATTTAAGTTACGAGGTGCATACATTTAACGACAACAATAATCATGAGCGTCCCGCAC
CCCAAGAACAATCTACACAAAACACTATGATTTCAATGCAATCAGAACAAAAATCAGATC
GATTCACCGCTTCCAACCTTGGGATGTTCCAATACATGAAGTTTGAGATAGGAGAAGATG
GAGATGATCATGAGGAAGAAGCAATCCTCACGAACAGGGAGAAACTGAGACACATCCTTC
ATTCTAAACCAATACATGTTGCAATCATAGTCCTAGTAGTGTTGGACAGTTTCCTTGTAG
TTGGTGAACTCCTTATTGACCTCAAAGTAATCATTGTACCACATGGTAATCCCGCACCAG
AGATATTACACGGGTTTTCTCTCTCAATTCTATCAATATTTATGGTGGAAATCGCTTTGA
AGATAATCGCCGATCATCGTCACTTCATACACCACAAGGTGGAAGTGTTGGATGCGGTTG
TCGTGGTGATATCGTTCGGTGTCGATATCGCTCTTATATTCGTCGGGGAGAGTGAAGCCC
TCGCTGCTATCGGACTCCTTGTCATTCTACGGCTGTGGAGAGTCTTCAGAATCATTAATG
GTATCATCGTAACAGTAAAAACTAAAGCAGACGATAGAGTTCATGAAATAAAGAAAAAGA
ATTCTGAGCTGGAATTACAAATTCATAATCTAGAAGAGAAACTCTCACAAAAGGAGCAAG
ATATGTCCCGCCTGCATGAGATTCTACGTTGCAATAATATCGATATCCCACCAACAGTGC
CTTTAACTACTTCAGTGCAAATCCATAGTACCACAACAGCCTCTGCTGATGTTTAAGTTC
CTCTTGTATTCCTGTGCCTTTCAAGACCAAAGTTGCAGTTCCATTTTCTTCAGTGCAATT
CTCTGTGTCAGTATTCCCGCCAATAAAGTACTACATTTTA

InterProScan

PANTHER
Hvcn1 (IPR031846) - T[104-349] 2.3E-65
Gene3D
Volt_channel_dom_sf (IPR027359) - T[147-279] 2.7E-19
Pfam
Ion_trans_dom (IPR005821) - T[191-275] 7.2E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HVCN1_HUMAN 46.409 % 120 1.11E-31