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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C10.59.v4....' > 
  2. Region 'REG00000085' > 
  3. Region 'REG00000386' > 
  4. Transcript 'Boleac.CG.SB_v3.S12....' > 
  5. Transcript 'KH2012:KH.L87.32.v1....'

Transcript Model

Transcript Id

KH2012:KH.L87.32.v1.A.SL4-1

Possible name(s)

CACNA1C; HVCN1; TMEM266

Gene model

KH2012:KH.L87.32

Location

KhL87 [43,772 / 47,135]

Sequences

Amino acid sequence

Length: 351

>KH.L87.32.v1.A.SL4-1
FARTIILIIMEGDNCNKSRHKSHNMINPNYASVRCTQPLPSVIQLRSRNKMIGITEDPSS
DSEPVSSNQPLLLTNLSYEVHTFNDNNNHERPAPQEQSTQNTMISMQSEQKSDRFTASNL
GMFQYMKFEIGEDGDDHEEEAILTNREKLRHILHSKPIHVAIIVLVVLDSFLVVGELLID
LKVIIVPHGNPAPEILHGFSLSILSIFMVEIALKIIADHRHFIHHKVEVLDAVVVVISFG
VDIALIFVGESEALAAIGLLVILRLWRVFRIINGIIVTVKTKADDRVHEIKKKNSELELQ
IHNLEEKLSQKEQDMSRLHEILRCNNIDIPPTVPLTTSVQIHSTTTASADV

Nucleotide sequence

Length: 1,241

>KH2012:KH.L87.32.v1.A.SL4-1
GAACAGGGAGAGACAAGTCGTATTTGTTTAGTATCTGTGGCATCAATCGTAGCCTAATAA
TTTATGAAGGTGAGAAAATAATTTGCAAGAACAATTATTCTTATAATCATGGAAGGCGAT
AATTGCAATAAATCTCGTCATAAAAGCCACAACATGATTAACCCTAATTATGCAAGTGTA
CGATGTACACAACCTCTTCCATCTGTAATCCAACTTCGATCTCGAAACAAAATGATTGGC
ATCACTGAAGACCCTTCTTCAGACTCTGAACCCGTATCCTCCAACCAGCCATTATTGCTC
ACAAATTTAAGTTACGAGGTGCATACATTTAACGACAACAATAATCATGAGCGTCCCGCA
CCCCAAGAACAATCTACACAAAACACTATGATTTCAATGCAATCAGAACAAAAATCAGAT
CGATTCACCGCTTCCAACCTTGGGATGTTCCAATACATGAAGTTTGAGATAGGAGAAGAT
GGAGATGATCATGAGGAAGAAGCAATCCTCACGAACAGGGAGAAACTGAGACACATCCTT
CATTCTAAACCAATACATGTTGCAATCATAGTCCTAGTAGTGTTGGACAGTTTCCTTGTA
GTTGGTGAACTCCTTATTGACCTCAAAGTAATCATTGTACCACATGGTAATCCCGCACCA
GAGATATTACACGGGTTTTCTCTCTCAATTCTATCAATATTTATGGTGGAAATCGCTTTG
AAGATAATCGCCGATCATCGTCACTTCATACACCACAAGGTGGAAGTGTTGGATGCGGTT
GTCGTGGTGATATCGTTCGGTGTCGATATCGCTCTTATATTCGTCGGGGAGAGTGAAGCC
CTCGCTGCTATCGGACTCCTTGTCATTCTACGGCTGTGGAGAGTCTTCAGAATCATTAAT
GGTATCATCGTAACAGTAAAAACTAAAGCAGACGATAGAGTTCATGAAATAAAGAAAAAG
AATTCTGAGCTGGAATTACAAATTCATAATCTAGAAGAGAAACTCTCACAAAAGGAGCAA
GATATGTCCCGCCTGCATGAGATTCTACGTTGCAATAATATCGATATCCCACCAACAGTG
CCTTTAACTACTTCAGTGCAAATCCATAGTACCACAACAGCCTCTGCTGATGTTTAAGTT
CCTCTTGTATTCCTGTGCCTTTCAAGACCAAAGTTGCAGTTCCATTTTCTTCAGTGCAAT
TCTCTGTGTCAGTATTCCCGCCAATAAAGTACTACATTTTA

InterProScan

PANTHER
Hvcn1 (IPR031846) - T[104-349] 2.3E-65
Gene3D
Volt_channel_dom_sf (IPR027359) - T[147-279] 2.7E-19
Pfam
Ion_trans_dom (IPR005821) - T[191-275] 7.2E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HVCN1_HUMAN 46.409 % 120 1.11E-31