Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L84.15.v5.A.ND2-1

Possible name(s)

ARF1; ARF3; SRPRB

Gene model

KH2012:KH.L84.15

Location

KhL84 [181,079 / 183,613]

Sequences

Amino acid sequence

Length: 248

>KH.L84.15.v5.A.ND2-1
CTYIIIGIFILMIGSRRIFLFLSFIFSVLWKLFFGGKAQRTGVLLAGLSDSGKTILFTQL
ISGVVKETHTSLKENEAQYIVEPNQGKTLTVVDLPGHEAIRLQYLEKYKDNARGIVFVVD
SGSFQKNVKDVAEFLFQIFTDKQLNKIAPSICIACNKQDLFNSKTKTVILNQLEKELNTV
RKTQSAALSSTSGGGEDSVFLGRKEEDFQFSHLSKFKIEFLECNAKPGLEESANVNLEEL
KMWISSLI

Nucleotide sequence

Length: 1,322

>KH2012:KH.L84.15.v5.A.ND2-1
CCGTCGCTGCCGTGTGGTACTAAGTGTTGTTTTATCAGCCGAAAATAAAGTTTCAGTCTA
TATTTTAATTACATGTGTGGACTGACTACGCACACAAGGTCTTAAAACAAAAGGCAGTAA
ATCAATTGCACTTCTGTTTTAAATAATATTTTCTTTTAATGTACATACATTATTATAGGA
ATATTTATTTTAATGATTGGGAGTAGGAGAATCTTTTTATTTTTGAGTTTTATTTTTTCA
GTGTTATGGAAATTATTCTTTGGTGGAAAAGCGCAAAGAACAGGTGTTTTACTAGCAGGA
TTATCTGATTCTGGGAAAACCATATTGTTTACTCAGCTAATATCTGGTGTAGTGAAAGAA
ACTCATACTTCACTCAAGGAAAATGAAGCACAATACATTGTGGAGCCAAATCAGGGCAAA
ACTCTAACGGTTGTTGATTTGCCTGGGCATGAGGCAATACGTCTTCAATATTTGGAAAAA
TACAAAGATAATGCCAGAGGTATAGTTTTTGTTGTGGACAGTGGAAGTTTCCAAAAAAAC
GTAAAAGATGTGGCAGAATTCCTGTTTCAAATTTTTACTGATAAGCAGCTGAATAAAATT
GCACCTTCAATCTGCATTGCATGTAACAAGCAAGATTTATTCAACTCAAAAACGAAAACC
GTCATACTAAACCAACTTGAAAAGGAATTAAACACAGTGAGAAAAACACAATCAGCGGCA
CTTTCTAGCACCTCTGGTGGTGGGGAAGATTCTGTGTTTCTTGGTCGTAAAGAGGAAGAC
TTTCAGTTTAGTCATCTGTCCAAGTTTAAGATTGAATTTTTGGAATGCAATGCTAAACCA
GGTTTGGAAGAGAGTGCAAATGTAAACTTGGAGGAATTGAAAATGTGGATTTCCTCACTT
ATATAATATTTGCTGTGTGTTGATTTTTCTGTACAGAAGATAGTCCGTTTGACTTGTGTA
GGAAAGTTACCATTTTTGTGTTTGTAATAATATCCTGATGATTACTGACAATGAAGATTA
GACAGATGATATGGGAACTACTACTTTTCTAGATGTCCGTCATATATAATGTTTTCAACA
TTTGAACTGTGTCGATCTATTACTACAGTCTACAATCTGATGGAACTGTTGTGATGAAAC
AACTTGAAACTTGTCCATTTTAAATGTTGGCATTTTTGTTTGTGTTGGTTATTGTTTAAA
ATCAGCAAAGGTGTTTTAGTGTTTTTTCGCAGGAGAAATTATATAGTAGGGTGGGGGAAG
ATGGGACACCATTTTATTGTATTTTCACGTCCTGTTTCGTAGTAAACAAAGAACAAACTA
TT

InterProScan

PANTHER	SRP_receptor_beta_su (IPR019009) - T[19-246] 1.8E-69
Pfam	SRP_receptor_beta_su (IPR019009) - T[40-214] 6.3E-56
CDD	SRP_receptor_beta_su (IPR019009) - T[43-245] 3.33181E-71
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[43-245] 8.33E-26

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SRPRB_HUMAN	47.706 %	215	8.77E-70