Aniseed - Transcript Card

Transcript 'Boschl.CG.Botznik201...' >
Transcript 'KH2012:KH.L84.15.v4....'

Transcript Model

Transcript Id

KH2012:KH.L84.15.v4.A.ND4-1

Possible name(s)

ARF1; ARF3; SRPRB

Gene model

KH2012:KH.L84.15

Location

KhL84 [179,254 / 183,613]

Sequences

Amino acid sequence

Length: 282

>KH.L84.15.v4.A.ND4-1
SVNDSDHWSYVIIMYNLRSCCEVKMEIQSSLTAYKSLLESYGISGNLLGVFISLLVVVVT
AVLWKLFFGGKAQRTGVLLAGLSDSGKTILFTQLISGVVKETHTSLKENEAQYIVEPNQG
KTLTVVDLPGHEAIRLQYLEKYKDNARGIVFVVDSGSFQKNVKDVAEFLFQIFTDKQLNK
IAPSICIACNKQDLFNSKTKTVILNQLEKELNTVRKTQSAALSSTSGGGEDSVFLGRKEE
DFQFSHLSKFKIEFLECNAKPGLEESANVNLEELKMWISSLI

Nucleotide sequence

Length: 1,336

>KH2012:KH.L84.15.v4.A.ND4-1
TATTGTTTTTGTACATTTTATTCTATTTAATGTGAAAATGCAAGTTTTGTCGCCTTTTTC
GTTGTTGGTGAAGTGTTAACGATAGTGATCACTGGTCATACGTCATAATAATGTATAACT
TAAGATCTTGTTGTGAAGTAAAAATGGAAATACAATCGTCACTGACTGCGTACAAGTCTC
TTCTGGAATCCTATGGAATATCGGGAAATTTGTTGGGAGTTTTCATCAGTCTTTTGGTTG
TGGTTGTTACAGCAGTGTTATGGAAATTATTCTTTGGTGGAAAAGCGCAAAGAACAGGTG
TTTTACTAGCAGGATTATCTGATTCTGGGAAAACCATATTGTTTACTCAGCTAATATCTG
GTGTAGTGAAAGAAACTCATACTTCACTCAAGGAAAATGAAGCACAATACATTGTGGAGC
CAAATCAGGGCAAAACTCTAACGGTTGTTGATTTGCCTGGGCATGAGGCAATACGTCTTC
AATATTTGGAAAAATACAAAGATAATGCCAGAGGTATAGTTTTTGTTGTGGACAGTGGAA
GTTTCCAAAAAAACGTAAAAGATGTGGCAGAATTCCTGTTTCAAATTTTTACTGATAAGC
AGCTGAATAAAATTGCACCTTCAATCTGCATTGCATGTAACAAGCAAGATTTATTCAACT
CAAAAACGAAAACCGTCATACTAAACCAACTTGAAAAGGAATTAAACACAGTGAGAAAAA
CACAATCAGCGGCACTTTCTAGCACCTCTGGTGGTGGGGAAGATTCTGTGTTTCTTGGTC
GTAAAGAGGAAGACTTTCAGTTTAGTCATCTGTCCAAGTTTAAGATTGAATTTTTGGAAT
GCAATGCTAAACCAGGTTTGGAAGAGAGTGCAAATGTAAACTTGGAGGAATTGAAAATGT
GGATTTCCTCACTTATATAATATTTGCTGTGTGTTGATTTTTCTGTACAGAAGATAGTCC
GTTTGACTTGTGTAGGAAAGTTACCATTTTTGTGTTTGTAATAATATCCTGATGATTACT
GACAATGAAGATTAGACAGATGATATGGGAACTACTACTTTTCTAGATGTCCGTCATATA
TAATGTTTTCAACATTTGAACTGTGTCGATCTATTACTACAGTCTACAATCTGATGGAAC
TGTTGTGATGAAACAACTTGAAACTTGTCCATTTTAAATGTTGGCATTTTTGTTTGTGTT
GGTTATTGTTTAAAATCAGCAAAGGTGTTTTAGTGTTTTTTCGCAGGAGAAATTATATAG
TAGGGTGGGGGAAGATGGGACACCATTTTATTGTATTTTCACGTCCTGTTTCGTAGTAAA
CAAAGAACAAACTATT

InterProScan

PANTHER	SRP_receptor_beta_su (IPR019009) - T[44-280] 1.1E-72
Pfam	SRP_receptor_beta_su (IPR019009) - T[74-248] 9.3E-56
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[77-279] 1.33E-25
CDD	SRP_receptor_beta_su (IPR019009) - T[77-279] 1.47811E-71

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SRPRB_HUMAN	47.489 %	215	1.93E-69