Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L84.15.v3.A.SL7-1

Possible name(s)

ARF1; ARF3; SRPRB

Gene model

KH2012:KH.L84.15

Location

KhL84 [179,850 / 183,613]

Sequences

Amino acid sequence

Length: 264

>KH.L84.15.v3.A.SL7-1
SCCEVKMEIQSSLTAYKSLLESYGISGNLLGVFISLLVVVVTAVLWKLFFGGKAQRTGVL
LAGLSDSGKTILFTQLISGVVKETHTSLKENEAQYIVEPNQGKTLTVVDLPGHEAIRLQY
LEKYKDNARGIVFVVDSGSFQKNVKDVAEFLFQIFTDKQLNKIAPSICIACNKQDLFNSK
TKTVILNQLEKELNTVRKTQSAALSSTSGGGEDSVFLGRKEEDFQFSHLSKFKIEFLECN
AKPGLEESANVNLEELKMWISSLI

Nucleotide sequence

Length: 1,311

>KH2012:KH.L84.15.v3.A.SL7-1
TAGGCCATATGTTACGGAGTGGTGTGCGTCTTTCCTATACATTGATTAAACGGAGTGAAA
ACTATTTGTGAAAAATGTGAACAGCGTCTCAACAACGTGATCTTGTTGTGAAGTAAAAAT
GGAAATACAATCGTCACTGACTGCGTACAAGTCTCTTCTGGAATCCTATGGAATATCGGG
AAATTTGTTGGGAGTTTTCATCAGTCTTTTGGTTGTGGTTGTTACAGCAGTGTTATGGAA
ATTATTCTTTGGTGGAAAAGCGCAAAGAACAGGTGTTTTACTAGCAGGATTATCTGATTC
TGGGAAAACCATATTGTTTACTCAGCTAATATCTGGTGTAGTGAAAGAAACTCATACTTC
ACTCAAGGAAAATGAAGCACAATACATTGTGGAGCCAAATCAGGGCAAAACTCTAACGGT
TGTTGATTTGCCTGGGCATGAGGCAATACGTCTTCAATATTTGGAAAAATACAAAGATAA
TGCCAGAGGTATAGTTTTTGTTGTGGACAGTGGAAGTTTCCAAAAAAACGTAAAAGATGT
GGCAGAATTCCTGTTTCAAATTTTTACTGATAAGCAGCTGAATAAAATTGCACCTTCAAT
CTGCATTGCATGTAACAAGCAAGATTTATTCAACTCAAAAACGAAAACCGTCATACTAAA
CCAACTTGAAAAGGAATTAAACACAGTGAGAAAAACACAATCAGCGGCACTTTCTAGCAC
CTCTGGTGGTGGGGAAGATTCTGTGTTTCTTGGTCGTAAAGAGGAAGACTTTCAGTTTAG
TCATCTGTCCAAGTTTAAGATTGAATTTTTGGAATGCAATGCTAAACCAGGTTTGGAAGA
GAGTGCAAATGTAAACTTGGAGGAATTGAAAATGTGGATTTCCTCACTTATATAATATTT
GCTGTGTGTTGATTTTTCTGTACAGAAGATAGTCCGTTTGACTTGTGTAGGAAAGTTACC
ATTTTTGTGTTTGTAATAATATCCTGATGATTACTGACAATGAAGATTAGACAGATGATA
TGGGAACTACTACTTTTCTAGATGTCCGTCATATATAATGTTTTCAACATTTGAACTGTG
TCGATCTATTACTACAGTCTACAATCTGATGGAACTGTTGTGATGAAACAACTTGAAACT
TGTCCATTTTAAATGTTGGCATTTTTGTTTGTGTTGGTTATTGTTTAAAATCAGCAAAGG
TGTTTTAGTGTTTTTTCGCAGGAGAAATTATATAGTAGGGTGGGGGAAGATGGGACACCA
TTTTATTGTATTTTCACGTCCTGTTTCGTAGTAAACAAAGAACAAACTATT

InterProScan

PANTHER	SRP_receptor_beta_su (IPR019009) - T[26-262] 1.0E-72
Pfam	SRP_receptor_beta_su (IPR019009) - T[56-230] 7.7E-56
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[59-261] 1.05E-25
CDD	SRP_receptor_beta_su (IPR019009) - T[59-261] 3.94444E-71

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SRPRB_HUMAN	47.489 %	216	6.88E-70