Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L84.15.v3.A.SL1-1

Possible name(s)

ARF1; ARF3; SRPRB

Gene model

KH2012:KH.L84.15

Location

KhL84 [179,853 / 183,613]

Sequences

Amino acid sequence

Length: 264

>KH.L84.15.v3.A.SL1-1
SCCEVKMEIQSSLTAYKSLLESYGISGNLLGVFISLLVVVVTAVLWKLFFGGKAQRTGVL
LAGLSDSGKTILFTQLISGVVKETHTSLKENEAQYIVEPNQGKTLTVVDLPGHEAIRLQY
LEKYKDNARGIVFVVDSGSFQKNVKDVAEFLFQIFTDKQLNKIAPSICIACNKQDLFNSK
TKTVILNQLEKELNTVRKTQSAALSSTSGGGEDSVFLGRKEEDFQFSHLSKFKIEFLECN
AKPGLEESANVNLEELKMWISSLI

Nucleotide sequence

Length: 1,308

>KH2012:KH.L84.15.v3.A.SL1-1
GCCATATGTTACGGAGTGGTGTGCGTCTTTCCTATACATTGATTAAACGGAGTGAAAACT
ATTTGTGAAAAATGTGAACAGCGTCTCAACAACGTGATCTTGTTGTGAAGTAAAAATGGA
AATACAATCGTCACTGACTGCGTACAAGTCTCTTCTGGAATCCTATGGAATATCGGGAAA
TTTGTTGGGAGTTTTCATCAGTCTTTTGGTTGTGGTTGTTACAGCAGTGTTATGGAAATT
ATTCTTTGGTGGAAAAGCGCAAAGAACAGGTGTTTTACTAGCAGGATTATCTGATTCTGG
GAAAACCATATTGTTTACTCAGCTAATATCTGGTGTAGTGAAAGAAACTCATACTTCACT
CAAGGAAAATGAAGCACAATACATTGTGGAGCCAAATCAGGGCAAAACTCTAACGGTTGT
TGATTTGCCTGGGCATGAGGCAATACGTCTTCAATATTTGGAAAAATACAAAGATAATGC
CAGAGGTATAGTTTTTGTTGTGGACAGTGGAAGTTTCCAAAAAAACGTAAAAGATGTGGC
AGAATTCCTGTTTCAAATTTTTACTGATAAGCAGCTGAATAAAATTGCACCTTCAATCTG
CATTGCATGTAACAAGCAAGATTTATTCAACTCAAAAACGAAAACCGTCATACTAAACCA
ACTTGAAAAGGAATTAAACACAGTGAGAAAAACACAATCAGCGGCACTTTCTAGCACCTC
TGGTGGTGGGGAAGATTCTGTGTTTCTTGGTCGTAAAGAGGAAGACTTTCAGTTTAGTCA
TCTGTCCAAGTTTAAGATTGAATTTTTGGAATGCAATGCTAAACCAGGTTTGGAAGAGAG
TGCAAATGTAAACTTGGAGGAATTGAAAATGTGGATTTCCTCACTTATATAATATTTGCT
GTGTGTTGATTTTTCTGTACAGAAGATAGTCCGTTTGACTTGTGTAGGAAAGTTACCATT
TTTGTGTTTGTAATAATATCCTGATGATTACTGACAATGAAGATTAGACAGATGATATGG
GAACTACTACTTTTCTAGATGTCCGTCATATATAATGTTTTCAACATTTGAACTGTGTCG
ATCTATTACTACAGTCTACAATCTGATGGAACTGTTGTGATGAAACAACTTGAAACTTGT
CCATTTTAAATGTTGGCATTTTTGTTTGTGTTGGTTATTGTTTAAAATCAGCAAAGGTGT
TTTAGTGTTTTTTCGCAGGAGAAATTATATAGTAGGGTGGGGGAAGATGGGACACCATTT
TATTGTATTTTCACGTCCTGTTTCGTAGTAAACAAAGAACAAACTATT

InterProScan

PANTHER	SRP_receptor_beta_su (IPR019009) - T[26-262] 1.0E-72
Pfam	SRP_receptor_beta_su (IPR019009) - T[56-230] 7.7E-56
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[59-261] 1.05E-25
CDD	SRP_receptor_beta_su (IPR019009) - T[59-261] 3.94444E-71

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SRPRB_HUMAN	47.489 %	216	6.88E-70