Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L84.15.v1.A.nonSL9-1

Possible name(s)

ARF1; ARF3; SRPRB

Gene model

KH2012:KH.L84.15

Location

KhL84 [179,906 / 183,613]

Sequences

Amino acid sequence

Length: 267

>KH.L84.15.v1.A.nonSL9-1
MDRSCCEVKMEIQSSLTAYKSLLESYGISGNLLGVFISLLVVVVTAVLWKLFFGGKAQRT
GVLLAGLSDSGKTILFTQLISGVVKETHTSLKENEAQYIVEPNQGKTLTVVDLPGHEAIR
LQYLEKYKDNARGIVFVVDSGSFQKNVKDVAEFLFQIFTDKQLNKIAPSICIACNKQDLF
NSKTKTVILNQLEKELNTVRKTQSAALSSTSGGGEDSVFLGRKEEDFQFSHLSKFKIEFL
ECNAKPGLEESANVNLEELKMWISSLI

Nucleotide sequence

Length: 1,310

>KH2012:KH.L84.15.v1.A.nonSL9-1
GAAAACTATTTGTGAAAAATGTGAACAGCGTCTCAACAACGTGGTAATATTTCTAATTCC
TAAAGTTACGGTTTACTTGTATTTCATTGAATGGATAGATCTTGTTGTGAAGTAAAAATG
GAAATACAATCGTCACTGACTGCGTACAAGTCTCTTCTGGAATCCTATGGAATATCGGGA
AATTTGTTGGGAGTTTTCATCAGTCTTTTGGTTGTGGTTGTTACAGCAGTGTTATGGAAA
TTATTCTTTGGTGGAAAAGCGCAAAGAACAGGTGTTTTACTAGCAGGATTATCTGATTCT
GGGAAAACCATATTGTTTACTCAGCTAATATCTGGTGTAGTGAAAGAAACTCATACTTCA
CTCAAGGAAAATGAAGCACAATACATTGTGGAGCCAAATCAGGGCAAAACTCTAACGGTT
GTTGATTTGCCTGGGCATGAGGCAATACGTCTTCAATATTTGGAAAAATACAAAGATAAT
GCCAGAGGTATAGTTTTTGTTGTGGACAGTGGAAGTTTCCAAAAAAACGTAAAAGATGTG
GCAGAATTCCTGTTTCAAATTTTTACTGATAAGCAGCTGAATAAAATTGCACCTTCAATC
TGCATTGCATGTAACAAGCAAGATTTATTCAACTCAAAAACGAAAACCGTCATACTAAAC
CAACTTGAAAAGGAATTAAACACAGTGAGAAAAACACAATCAGCGGCACTTTCTAGCACC
TCTGGTGGTGGGGAAGATTCTGTGTTTCTTGGTCGTAAAGAGGAAGACTTTCAGTTTAGT
CATCTGTCCAAGTTTAAGATTGAATTTTTGGAATGCAATGCTAAACCAGGTTTGGAAGAG
AGTGCAAATGTAAACTTGGAGGAATTGAAAATGTGGATTTCCTCACTTATATAATATTTG
CTGTGTGTTGATTTTTCTGTACAGAAGATAGTCCGTTTGACTTGTGTAGGAAAGTTACCA
TTTTTGTGTTTGTAATAATATCCTGATGATTACTGACAATGAAGATTAGACAGATGATAT
GGGAACTACTACTTTTCTAGATGTCCGTCATATATAATGTTTTCAACATTTGAACTGTGT
CGATCTATTACTACAGTCTACAATCTGATGGAACTGTTGTGATGAAACAACTTGAAACTT
GTCCATTTTAAATGTTGGCATTTTTGTTTGTGTTGGTTATTGTTTAAAATCAGCAAAGGT
GTTTTAGTGTTTTTTCGCAGGAGAAATTATATAGTAGGGTGGGGGAAGATGGGACACCAT
TTTATTGTATTTTCACGTCCTGTTTCGTAGTAAACAAAGAACAAACTATT

InterProScan

PANTHER	SRP_receptor_beta_su (IPR019009) - T[29-265] 1.3E-72
Pfam	SRP_receptor_beta_su (IPR019009) - T[59-233] 7.9E-56
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[62-264] 1.1E-25
CDD	SRP_receptor_beta_su (IPR019009) - T[62-264] 2.53898E-71

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SRPRB_HUMAN	47.489 %	216	7.55E-70