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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.S555.1.v2....' > 
  2. Transcript 'KH2012:KH.L7.5.v3.A....'

Transcript Model

Transcript Id

KH2012:KH.L7.5.v3.A.SL2-1

Possible name(s)

RAB2A; RAB39A; RAB39B

Gene model

KH2012:KH.L7.5

Location

KhL7 [75,167 / 80,054]

Sequences

Amino acid sequence

Length: 226

>KH.L7.5.v3.A.SL2-1
CNKWFPQIVMSDMVARSETIWAYQFRVVLLGDSTVGKSALLRRFTDGCFLEVSDPTVGVD
FYSRLIEISPGTRIKLQLWDTAGQERFRSITRSYYRSSVGALLVYDISNRQSFLHVVTWA
EEARLHVAPRHVSFALVGQKCDLEEHRQVPTEEASNFARLHKMPFIEASAKNGKNVEKSF
VMLTELIYRLIQSGDIIMDEQWDGIKCGLVPKPLSLDEDENKSCCA

Nucleotide sequence

Length: 1,466

>KH2012:KH.L7.5.v3.A.SL2-1
AAGTTCCATTTTTTTATATTTTACCTGTAACTGTGTAGTATATTGCGTGTAATGTTTAAA
TTGCAAAACATCCTAAGTTTGTCCACGGCTCTGCTGGAAGGATTGTTTTTCTCCGGATTA
GTCTTCGGATGGCCTTCTATGAGCTCGGTGCTGGAAAGTGCGGGGTATTTTAATTATTTA
TGCGATAATGACGTCACTAATGCAACAAATGGTTTCCCCAGATAGTCATGTCTGACATGG
TGGCTCGTAGTGAGACAATATGGGCGTACCAGTTCCGTGTTGTTCTGCTTGGTGATTCTA
CAGTGGGAAAGTCGGCTTTATTACGAAGATTCACCGATGGTTGTTTCTTAGAGGTATCCG
ACCCCACAGTAGGGGTGGACTTTTATTCTCGTCTCATAGAAATATCACCCGGCACACGAA
TTAAACTCCAACTGTGGGACACGGCGGGCCAGGAGAGATTCAGGTCCATCACACGGTCAT
ACTATCGTAGCTCGGTGGGTGCGCTTCTCGTTTACGATATTTCCAACAGACAAAGTTTCC
TCCATGTTGTGACATGGGCCGAAGAAGCACGACTCCACGTCGCCCCCCGACACGTTTCAT
TCGCTCTCGTCGGGCAGAAATGCGACCTAGAGGAACATAGACAGGTACCAACAGAAGAAG
CGTCCAACTTTGCACGTTTACACAAGATGCCATTTATTGAAGCTTCAGCCAAGAACGGGA
AGAACGTGGAAAAGTCGTTTGTTATGTTGACCGAACTTATATACAGATTAATACAGTCCG
GTGACATCATAATGGATGAACAATGGGACGGGATTAAATGTGGTTTGGTCCCGAAACCTC
TAAGTTTGGATGAGGACGAAAATAAGTCGTGCTGCGCTTGATGTGGATGTGGTGGACCTG
GTGCTCATGAAGTGTCGGGTTCAAGTGCTACAAAGTATGTTACAAACAAAATTCAAACCA
AACGAATAGTTTACTATAAAATGTACATATTTTTCCTAGAATGGCATCAAGTCTTTTATT
CAAATAGAATCATGATGTCATTTATGCAAAACATCTCGTGTTGGTTGTGTTTGACTTTTG
TTTGTCACTTATAATCCTTTGGACTATTCTTTATATTACCTGGTGGTTATTTTGTTGCAG
TATAAACTAACTTATCGCATCTGTAGCAGTATTCTATTTCAGCCAAAAACATTTTATTGT
TTTTACAGAGTTTTTTTTAAATGTTGTAAATTTATATTTCCGCAAATTTGTTTCATTTTC
TTCAATCATTTCTTCAACATAGATGTTTTATTGAATCATAGATTTTATGGTGTTTTGTTA
TGTTTCTATTTATGGTGTTTTGTTTTTTTTGTGTCGTCAGGTTTTTACAAAGTCCTATTA
AGTATGCAGTTGCCACATATGGTACCTAAGGTTGGCGCCATATTGTTATTACTTCTTTTG
CACAAAGTTATTGCACTGTTACGTCA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[23-216] 1.23E-55
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[23-182] 4.1E-32
Pfam
Small_GTPase (IPR001806) - T[26-188] 6.0E-55

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAB2A_HUMAN 51.064 % 190 4.32E-61
RB39B_HUMAN 58.252 % 258 4.33E-88
RB39A_HUMAN 58.373 % 248 6.75E-84