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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.541.v4....' > 
  2. Transcript 'KH2012:KH.L114.7.v1....' > 
  3. Transcript 'KH2012:KH.L116.85.v1...' > 
  4. Transcript 'KH2012:KH.S916.1.v2....' > 
  5. Transcript 'KH2012:KH.L7.5.v2.A....'

Transcript Model

Transcript Id

KH2012:KH.L7.5.v2.A.ND3-1

Possible name(s)

RAB2A; RAB39A; RAB39B

Gene model

KH2012:KH.L7.5

Location

KhL7 [74,993 / 80,054]

Sequences

Amino acid sequence

Length: 226

>KH.L7.5.v2.A.ND3-1
RLFRFPQIVMSDMVARSETIWAYQFRVVLLGDSTVGKSALLRRFTDGCFLEVSDPTVGVD
FYSRLIEISPGTRIKLQLWDTAGQERFRSITRSYYRSSVGALLVYDISNRQSFLHVVTWA
EEARLHVAPRHVSFALVGQKCDLEEHRQVPTEEASNFARLHKMPFIEASAKNGKNVEKSF
VMLTELIYRLIQSGDIIMDEQWDGIKCGLVPKPLSLDEDENKSCCA

Nucleotide sequence

Length: 1,376

>KH2012:KH.L7.5.v2.A.ND3-1
AAAACACACGAGGTTAATCGATTGTTTTGTCATAAAGCAAACAAAGCGAAGATTAGAACG
TCGCGGTGTTTCGATTGATGTTTTAGAAACTGCAATGCTTTGGATGTTAGCGTTTGTTTC
GGTTTCCCCAGATAGTCATGTCTGACATGGTGGCTCGTAGTGAGACAATATGGGCGTACC
AGTTCCGTGTTGTTCTGCTTGGTGATTCTACAGTGGGAAAGTCGGCTTTATTACGAAGAT
TCACCGATGGTTGTTTCTTAGAGGTATCCGACCCCACAGTAGGGGTGGACTTTTATTCTC
GTCTCATAGAAATATCACCCGGCACACGAATTAAACTCCAACTGTGGGACACGGCGGGCC
AGGAGAGATTCAGGTCCATCACACGGTCATACTATCGTAGCTCGGTGGGTGCGCTTCTCG
TTTACGATATTTCCAACAGACAAAGTTTCCTCCATGTTGTGACATGGGCCGAAGAAGCAC
GACTCCACGTCGCCCCCCGACACGTTTCATTCGCTCTCGTCGGGCAGAAATGCGACCTAG
AGGAACATAGACAGGTACCAACAGAAGAAGCGTCCAACTTTGCACGTTTACACAAGATGC
CATTTATTGAAGCTTCAGCCAAGAACGGGAAGAACGTGGAAAAGTCGTTTGTTATGTTGA
CCGAACTTATATACAGATTAATACAGTCCGGTGACATCATAATGGATGAACAATGGGACG
GGATTAAATGTGGTTTGGTCCCGAAACCTCTAAGTTTGGATGAGGACGAAAATAAGTCGT
GCTGCGCTTGATGTGGATGTGGTGGACCTGGTGCTCATGAAGTGTCGGGTTCAAGTGCTA
CAAAGTATGTTACAAACAAAATTCAAACCAAACGAATAGTTTACTATAAAATGTACATAT
TTTTCCTAGAATGGCATCAAGTCTTTTATTCAAATAGAATCATGATGTCATTTATGCAAA
ACATCTCGTGTTGGTTGTGTTTGACTTTTGTTTGTCACTTATAATCCTTTGGACTATTCT
TTATATTACCTGGTGGTTATTTTGTTGCAGTATAAACTAACTTATCGCATCTGTAGCAGT
ATTCTATTTCAGCCAAAAACATTTTATTGTTTTTACAGAGTTTTTTTTAAATGTTGTAAA
TTTATATTTCCGCAAATTTGTTTCATTTTCTTCAATCATTTCTTCAACATAGATGTTTTA
TTGAATCATAGATTTTATGGTGTTTTGTTATGTTTCTATTTATGGTGTTTTGTTTTTTTT
GTGTCGTCAGGTTTTTACAAAGTCCTATTAAGTATGCAGTTGCCACATATGGTACCTAAG
GTTGGCGCCATATTGTTATTACTTCTTTTGCACAAAGTTATTGCACTGTTACGTCA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[23-216] 1.23E-55
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[23-182] 4.1E-32
Pfam
Small_GTPase (IPR001806) - T[26-188] 6.0E-55

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAB2A_HUMAN 51.064 % 190 4.98E-61
RB39B_HUMAN 58.252 % 259 3.05E-88
RB39A_HUMAN 58.373 % 248 5.31E-84