- Transcript 'KH2012:KH.L60.12.v1....'
Transcript Model
Transcript Id
KH2012:KH.L60.12.v1.A.nonSL2-1
Possible name(s)
TFDP1; TFDP2; TFDP3
Gene model
Location
KhL60 [24,626 / 28,116]
Amino acid sequence
Length: 543
>KH.L60.12.v1.A.nonSL2-1
NNFVSNQRRMEVEQNAKSTCATIRPHAPTISVVHTTPVKGQSVFLTTPSSGSGIVRTAGS
QVRVVQTTPQQTPQVVRIIKAGEAVTGSPNVINIRAPLASPVKGGAIINIPTGSKLLTHP
GPKLKVGDTITIQKSNIINENQSSSNDPNDVIQPSGTKLVKVVTSNQTPVFIAPNTNNMK
QMTPSTPQNKSFFSQQMASPVRINNMSPTWNASSPSYKRPSMFNDPAQMVESKRRRTPTT
DKGSKGLRHFAMLVCEKVKQKVTTTYNEVADELVSEFADHQRQVTDQYDQKNIRRRVYDA
LNVLMAMDIIYKDKKDIHWVGLPTNSAQEVQTLQTEKKNRQQRIQQKTLQLHELILQQIA
FKNLVQRNKRIEQTQGFPADNSSIQLPFIIVNTSKKTVIDCSISNDKYEYMFNFDNTFEI
HDDIEVLKRMGMAYGLEAGVCSNDNLRTAMTLVPPVLKPYLEQMAGKTSGEVSEASVGTP
EVKIEPQTIDISSFTPDDEVAMVIDGGVGCAGSSRSSSAVYSGTPLSGDIESGSESRGST
PLF
Nucleotide sequence
Length: 1,931
>KH2012:KH.L60.12.v1.A.nonSL2-1
AATAATTTTGTTTCAAATCAACGAAGGATGGAAGTCGAACAGAACGCTAAATCCACTTGC
GCTACCATTAGACCACATGCCCCAACCATTAGTGTGGTACATACTACACCAGTTAAGGGA
CAAAGTGTATTTCTAACAACCCCATCTTCGGGAAGTGGTATTGTAAGGACTGCAGGTTCC
CAAGTTCGTGTCGTCCAAACTACACCTCAGCAAACACCACAAGTTGTGCGGATTATTAAA
GCAGGGGAAGCAGTAACTGGATCACCGAACGTCATCAATATACGAGCCCCCCTTGCAAGT
CCCGTGAAAGGTGGCGCCATAATCAATATACCAACCGGATCGAAGCTTCTGACGCACCCA
GGACCCAAACTAAAGGTTGGCGATACGATAACAATACAGAAGTCAAATATAATAAACGAA
AACCAAAGTTCCAGCAATGACCCCAACGATGTGATTCAACCAAGCGGAACAAAGTTGGTG
AAAGTCGTCACATCGAACCAAACACCCGTGTTCATTGCTCCCAACACAAACAACATGAAA
CAGATGACGCCGTCAACGCCTCAAAACAAATCTTTCTTCTCGCAACAAATGGCTTCACCA
GTTCGAATAAACAATATGTCGCCAACATGGAATGCAAGTAGCCCAAGTTATAAACGACCG
TCCATGTTCAATGATCCAGCACAGATGGTTGAAAGCAAACGACGACGCACCCCAACTACA
GACAAAGGCAGCAAGGGTTTGCGACACTTTGCGATGTTGGTTTGTGAGAAAGTGAAACAG
AAAGTGACAACAACGTACAACGAGGTTGCGGACGAACTCGTGTCGGAGTTTGCCGACCAT
CAACGACAAGTTACTGATCAGTATGACCAGAAGAACATTCGACGGCGAGTTTACGATGCA
TTAAACGTATTAATGGCCATGGATATCATATATAAGGACAAGAAGGATATCCATTGGGTG
GGGTTGCCGACGAACTCAGCGCAAGAAGTCCAAACATTACAGACTGAAAAGAAAAATCGT
CAACAAAGAATTCAACAGAAGACTCTGCAGTTACACGAGCTCATATTACAGCAAATTGCC
TTCAAGAATTTGGTTCAACGCAACAAACGTATCGAACAAACGCAAGGTTTCCCCGCCGAT
AATTCATCGATCCAGCTTCCTTTTATTATCGTTAATACAAGCAAGAAGACCGTCATTGAC
TGCAGTATTTCTAATGATAAGTACGAGTACATGTTCAACTTTGATAATACGTTCGAGATC
CACGATGATATCGAAGTTTTGAAACGCATGGGGATGGCCTACGGGTTGGAGGCCGGGGTG
TGTAGTAATGACAACCTTCGAACGGCTATGACTCTAGTGCCCCCGGTGTTGAAACCTTAC
CTTGAGCAGATGGCTGGCAAAACAAGTGGGGAAGTTAGTGAAGCAAGTGTTGGAACACCC
GAAGTGAAGATTGAGCCGCAAACCATCGACATCTCGTCGTTCACCCCTGACGATGAGGTT
GCCATGGTGATCGACGGGGGCGTGGGGTGCGCGGGGTCGTCGAGGTCATCCTCCGCTGTT
TATTCAGGGACACCACTAAGCGGCGATATAGAGTCGGGGAGTGAATCACGAGGATCTACT
CCGCTGTTCTAACAACTTACCCACACTCCCTTGTTAAATATGGAAAGCAAATTTTAGCTT
TTCGCGTTTTTTAAATTTGTTGAAAGATGAACATTCCATAGACACAACATTAATGCTAGA
ATCTTTATTAGCGAATGCACTACATGGATGTCATTATAACAACGTAGTAATAGACAACAC
ATGACTTGGGGTTTCACTCAGGGATTATTTTTATAAAAAGGGGCAAAAACTTTTTTTCGT
TGAAAATTTCAAATTTCTTGTATTTTCAAAGTTTGCTGCCACGAGTTGTAAAATAAAGAG
AGCTGCTCAAC
| PANTHER |
Transcrpt_fac_DP (IPR015648) - T[175-541] 4.7E-122 |
| PANTHER |
DP-2 (IPR028314) - T[175-541] 4.7E-122 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[236-326] 5.3E-39 |
| SMART |
E2F_WHTH_DNA-bd_dom (IPR003316) - T[242-321] 4.4E-31 |
| Pfam |
E2F_WHTH_DNA-bd_dom (IPR003316) - T[244-321] 4.5E-24 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[245-322] 1.26E-19 |
| CDD |
Transc_factor_DP_C (IPR014889) - T[326-430] 3.67721E-58 |
| Gene3D |
TF_DP_C_sf (IPR038168) - T[327-468] 5.2E-59 |
| SMART |
Transc_factor_DP_C (IPR014889) - T[328-471] 5.8E-82 |
| SUPERFAMILY |
E2F-DP_heterodim (IPR037241) - T[328-471] 6.8E-53 |
| Pfam |
Transc_factor_DP_C (IPR014889) - T[328-465] 1.3E-58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TFDP1_HUMAN | 57.895 % | 333 | 9.91E-110 |
| TFDP2_HUMAN | 65.339 % | 314 | 6.83E-102 |
| TFDP3_HUMAN | 53.814 % | 253 | 5.22E-79 |
