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- Transcript 'KH2012:KH.L59.12.v1....'
Transcript Model
Transcript Id
KH2012:KH.L59.12.v1.B.ND1-1
Possible name(s)
ZIC1; ZIC2; ZIC3
Gene model
Location
KhL59 [4,324 / 5,238]
Amino acid sequence
Length: 243
>KH.L59.12.v1.B.ND1-1
RKSKGFKAKYKLVNHIRVHTGEKPFVCPFPDCGKTFGRSENLKIHQRTHTGERPFPCKFP
GCERRFANSSDRKKHSYMHNTEKLYACKVSCDRSYTHPSSLRKHIRMHESNGDVIDNGSN
HSPTSSCGSVEDVARKQNSVENNFVQTYLPPRFTSSPIHAPLATYDASESLKQKFPPIEK
QAKFTENFINHGQDMTSSLPQLNLNTASTEDCYNNYYIPQISNVTYKSSFSPVSFQLPSH
FVA
Nucleotide sequence
Length: 733
>KH2012:KH.L59.12.v1.B.ND1-1
AAGAAAATCCAAAGGTTTTAAAGCGAAGTACAAATTGGTGAATCATATTCGAGTTCATAC
TGGGGAGAAACCATTTGTTTGCCCTTTTCCTGATTGTGGAAAAACGTTTGGAAGAAGCGA
GAATTTAAAGATCCATCAAAGAACTCACACAGGTGAACGACCTTTTCCTTGCAAATTTCC
CGGATGTGAAAGACGGTTTGCAAACAGTTCCGATCGTAAGAAGCATAGTTATATGCACAA
CACTGAAAAACTTTATGCGTGTAAGGTAAGTTGCGACCGAAGCTACACTCATCCAAGTTC
ACTACGTAAGCACATACGTATGCATGAATCCAATGGTGACGTAATCGACAACGGATCCAA
TCATTCTCCCACGAGTTCGTGTGGTTCAGTCGAAGATGTAGCTCGAAAACAAAACTCCGT
TGAAAATAATTTTGTTCAGACGTATTTACCTCCACGATTTACGTCATCACCGATTCATGC
ACCTTTAGCCACGTATGATGCTTCAGAAAGTTTGAAACAAAAGTTTCCCCCTATTGAGAA
GCAAGCTAAATTCACAGAAAATTTTATAAACCACGGACAAGATATGACATCATCTCTACC
TCAATTAAACTTGAACACAGCTTCAACCGAAGATTGTTACAACAATTACTATATACCTCA
AATATCTAATGTAACTTATAAATCTTCTTTTTCTCCTGTCTCGTTTCAATTACCTTCGCA
TTTTGTCGCTTAA
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[1-24] 9.536 - T[25-54] 17.059 - T[55-84] 10.408 - T[85-113] 11.739 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[6-62] 2.06E-20 - T[53-108] 5.15E-9 |
| SMART |
Znf_C2H2_type (IPR013087) - T[25-49] 1.0E-4 - T[55-79] 0.044 - T[85-108] 0.079 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[27-49] . - T[57-79] . - T[87-108] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC4_HUMAN | 66.667 % | 182 | 3.59E-56 |
| ZIC2_HUMAN | 69.531 % | 186 | 7.06E-56 |
| ZIC3_HUMAN | 59.036 % | 189 | 1.46E-57 |