- Region 'REG00000619' >
- Region 'REG00000502' >
- Region 'REG00000627' >
- Region 'REG00000612' >
- Transcript 'KH2012:KH.L59.1.v1.B...'
Transcript Model
Transcript Id
KH2012:KH.L59.1.v1.B.nonSL3-1
Possible name(s)
ZIC2; ZIC3; ZIC4
Gene model
Location
KhL59 [343 / 1,755]
Amino acid sequence
Length: 354
>KH.L59.1.v1.B.nonSL3-1
ISLRQSAYQRTSPSYNMYSNVMVNRPYAAYDPRESLTAHASFLQGHQQPIDSKSYSMANH
PSASYYPGYGMIPHFAQSLESHLQGMHNSNSRENFIQCKYPTHSTLTNPIACQKRKGFKA
KYKLVNHIRVHTGEKPFICPFPDCGKTFGRSENLKIHQRTHTGERPFPCKFPGCERRFAN
SSDRKKHSYMHNTEKLYACKYEGCDRSYTHPSSLRKHIRMHESNGDVIDNGSNHSPTSSC
GSVEDVAREQNSVENNSVSTYLPPRFTSSPIHAPLATYDASEKQKFSRVEKQAKFTEDFM
NHGQDVTSSPPQLNLNTALTEDCYNNYYIPQISNETYKSSFSPVSFQLPTHFVA
Nucleotide sequence
Length: 1,128
>KH2012:KH.L59.1.v1.B.nonSL3-1
CATTAGTTTACGGCAGTCAGCATACCAGAGAACATCTCCATCTTACAATATGTATTCTAA
TGTAATGGTTAATCGTCCCTATGCAGCATATGATCCAAGAGAAAGTCTAACAGCTCACGC
ATCGTTTCTTCAAGGACACCAACAACCCATTGATTCCAAGTCTTACTCGATGGCTAATCA
TCCAAGTGCGTCATATTACCCAGGATATGGGATGATTCCTCATTTTGCTCAATCCTTGGA
GTCTCACCTTCAAGGAATGCACAATTCCAACAGTAGAGAGAATTTCATCCAGTGCAAATA
TCCGACGCATTCGACTCTCACGAATCCGATTGCTTGCCAAAAACGCAAAGGTTTCAAAGC
AAAGTACAAATTGGTGAATCATATTCGAGTTCATACTGGGGAGAAACCATTTATTTGCCC
CTTTCCTGATTGTGGTAAAACGTTTGGAAGAAGCGAGAATTTAAAGATCCATCAAAGAAC
GCACACAGGTGAACGACCCTTTCCTTGTAAATTTCCCGGATGTGAAAGACGGTTTGCAAA
CAGTTCCGATCGTAAGAAGCATAGTTACATGCACAACACTGAAAAACTTTATGCGTGTAA
GTACGAAGGTTGCGACCGAAGCTACACTCATCCAAGTTCACTACGTAAGCACATACGTAT
GCATGAATCCAATGGTGACGTAATCGACAACGGATCCAATCATTCTCCCACGAGCTCGTG
TGGTTCAGTAGAAGATGTAGCTCGAGAACAAAACTCCGTTGAAAATAATTCCGTTTCAAC
ATATTTACCTCCACGATTTACGTCATCGCCGATTCATGCACCTTTAGCCACTTATGATGC
TTCAGAAAAACAAAAATTTTCCCGTGTTGAGAAGCAAGCTAAATTCACAGAAGATTTTAT
GAACCACGGACAAGATGTGACATCATCTCCACCTCAATTAAACTTGAACACAGCTTTAAC
CGAAGATTGTTACAACAATTACTATATACCTCAAATATCTAATGAAACTTATAAATCTTC
CTTTTCTCCTGTCTCGTTTCAATTACCCACGCATTTTGTTGCGTAAAATGTTTACTCGTT
TTTTATTTGCGGTACTTTATAACAAAATACAATATATCTATGAAACAA
| SMART |
Znf_C2H2_type (IPR013087) - T[110-131] 56.0 - T[137-161] 1.3E-4 - T[167-191] 0.044 - T[197-221] 1.8E-4 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[116-136] 9.203 - T[137-166] 16.955 - T[167-196] 10.408 - T[197-226] 11.24 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[118-174] 4.1E-20 - T[178-222] 5.54E-10 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[139-161] . - T[169-191] . - T[199-221] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC4_HUMAN | 67.424 % | 185 | 4.83E-56 |
| ZIC2_HUMAN | 68.217 % | 183 | 2.22E-53 |
| ZIC3_HUMAN | 68.217 % | 185 | 1.51E-54 |