- Transcript 'KH2012:KH.L57.25.v1....'
Transcript Model
Transcript Id
KH2012:KH.L57.25.v1.A.SL1-1
Possible name(s)
FOXC1; FOXC2; FOXL1
Gene model
Location
KhL57 [98,135 / 106,045]
Amino acid sequence
Length: 456
>KH.L57.25.v1.A.SL1-1
MYQAPTYQHHAMTSMVAVQRLQAATITSTCTITTIHQNSKDMVKPPYSYIALIAMAIQNA
PDKKVTLNGIYQWIMERFPFYRENKQGWQNSIRHNLSLNECFVKIPRDDKKPGKGSYWTM
DPDAYNMFENGSYLRRRKRFKRKQDGGPKGKREKLDANSDSMKSDDGSPSAKSDSKNPNQ
KSDSDDDGQYKYEAGDVAVNEGFASTGVAKVEPLDTAQAFSSSVIESNGNMEGYNSCLTP
NTGQHDNTEVSMLQLTRPDSSGSSVVSALPNADPTFQPLHTDEDPTNMRHSYNYPYNSSH
YNTHSLVSSPQTNEGNVSYQQHDINDIQTSSAYENTPSPTSEPQNVERWYPEQDHSSHQD
NATMVASAPSLMPQNASTSPDHYPADQHNHSQQQQPYYLHPNSEFLNPMTCVANGAQDYA
AQGYAAHIQQSASYYGQTYTIPHQHRAFSAYDYTKY
Nucleotide sequence
Length: 2,433
>KH2012:KH.L57.25.v1.A.SL1-1
TGTTAGTGTAAGTTAAGTTACGTTGAACACAGGACACCGAATCCTTGGTTTGATTCTCTA
TAATGACAATGCAAATCCGGTACCCGTCGTCCACCCACCACGGGGCGGGAAACAATATTC
TGCCGGCAGTCGGGCCTCCGAACCCCGCCAGCATGTATGGCGCGCACCCGAACCCAGCAG
AGCCGAGCTATTACCACTACCCAACGTCGAGCTATACCAATTTGAATGTACCAGGCGCCC
ACCTACCAACACCATGCAATGACCAGTATGGTGGCAGTGCAGCGTTTACAAGCGGCTACC
ATAACCAGCACCTGCACCATCACCACCATCCACCAGAACAGCAAGGACATGGTCAAACCA
CCGTATTCATATATAGCGCTCATTGCAATGGCGATCCAGAACGCCCCGGACAAAAAGGTG
ACATTGAATGGAATCTACCAATGGATCATGGAAAGGTTTCCTTTCTACAGGGAGAACAAG
CAGGGTTGGCAGAACTCCATTCGTCACAACTTGTCACTCAACGAGTGCTTTGTCAAAATC
CCGAGGGACGACAAAAAGCCGGGGAAGGGAAGTTATTGGACCATGGATCCGGACGCTTAT
AATATGTTTGAAAATGGCAGCTATCTTCGCCGAAGAAAGAGGTTTAAGCGGAAACAAGAT
GGCGGACCTAAAGGAAAAAGGGAGAAGTTGGACGCGAACTCGGATTCCATGAAATCCGAC
GACGGCTCACCCTCGGCGAAAAGTGATTCGAAAAACCCAAACCAGAAATCCGATTCCGAT
GACGACGGGCAGTATAAATACGAAGCTGGTGACGTGGCGGTAAATGAAGGTTTCGCTTCA
ACAGGGGTTGCCAAAGTTGAACCACTAGATACAGCGCAAGCGTTTTCATCTTCAGTGATC
GAAAGCAATGGAAACATGGAAGGTTATAATAGTTGTCTTACACCGAACACTGGTCAACAC
GACAACACCGAAGTATCCATGCTGCAGCTTACAAGACCTGACTCATCAGGTTCAAGTGTT
GTATCCGCACTACCCAATGCAGACCCCACCTTTCAACCATTACATACCGATGAAGACCCC
ACAAACATGAGACACAGTTACAACTACCCTTATAACAGCTCCCACTACAATACACATAGT
TTAGTATCTTCCCCACAAACCAATGAAGGCAACGTCTCATATCAGCAGCACGACATCAAC
GATATCCAGACATCAAGCGCATATGAGAACACTCCCTCCCCCACCTCAGAGCCGCAAAAT
GTGGAGCGATGGTATCCTGAACAAGATCATAGCAGCCATCAAGACAATGCTACCATGGTG
GCCTCGGCTCCGTCCCTGATGCCGCAAAACGCGAGCACATCTCCCGACCATTACCCCGCC
GATCAGCATAATCATTCCCAGCAGCAACAGCCTTATTATCTTCATCCAAACAGCGAGTTT
CTCAATCCAATGACCTGCGTAGCTAACGGTGCGCAAGATTACGCCGCGCAAGGTTACGCT
GCGCACATCCAACAGAGTGCAAGTTATTACGGGCAAACTTACACCATCCCGCACCAACAT
CGAGCATTCTCTGCTTACGATTACACTAAGTACTGACTTCATACATTGCGTACGTAAGCT
GCGGGTCAACTATGTTCAAACCCTCAAAATACGAAGGGGTGGCAACTGCAATAATTCGCC
AAAACCAATTTCCTTAATTGACCGAGTTGTTCTGTTATCGTAGTCTGTGTAGTGGTAGAC
CATACGCTTGTACTGGTAGCTTAGCAGAACGGATGCGACGCCAAACAATTAAATCTGATT
CTAAAATAATTTGGACTTTAATAAGCCAGCATGTGTTCTATACACGGCGCCTTTTATCTC
GTCAAGCAAACATTATCGACGTCTTAACCCGCTGAATTCTACGAAACCGAGAAAACGTTT
CGTCTCACAAGCAATTATATGCATGTCGCCGGGTCTCATACCAGCCTAGGTGGCACCTTG
ATACGATAGAAGGGAATTTATGATTGATTTCCCTTGCTCAAAGTTAGGGAGCGACTTTTT
ATGTTTTTTTAATTGTGTTCATTTCAAATTTGCAGTAATTAGAAAATATGTCGGCAAAAG
GTTTGCGCTTACCGCCGTGATAGCGAATTCGCTGTATGGTGTACAACGTATGCTGCTATA
CATGGTCAGCTTATTTAAACCAAACCTATTACATCAGTGTATATATGCGACACAAAGTAT
TCAGCAATTGTAAGTTATATTTCAACGTACTGCTTATATATCATGTGTTATGTTTTGAAC
TGTGCCTCGTGGGAGATTTATTCTAGATACTTTCACTGTGTATTCCGTACTTCGATGCGC
GGAAGCTGAAAATATCCCGCGCATGTCGAGTTTTCTATTCACTATTACGTCATAACCACA
TTTTCGTAATCGTAATAAACGCGCGAACATCCA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[42-143] 8.5E-49 |
| SMART |
Fork_head_dom (IPR001766) - T[42-132] 4.2E-64 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[43-138] 1.22E-42 |
| CDD |
Fork_head_dom (IPR001766) - T[44-121] 1.1186E-53 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[44-138] 41.448 |
| PRINTS |
Fork_head_dom (IPR001766) - T[44-57] 7.7E-24 - T[65-82] 7.7E-24 - T[88-105] 7.7E-24 |
| Pfam |
Fork_head_dom (IPR001766) - T[44-128] 5.1E-41 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[44-57] . |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[88-94] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXC2_HUMAN | 58.696 % | 209 | 5.19E-62 |
| FOXC1_HUMAN | 81.897 % | 207 | 4.18E-61 |
| FOXL1_HUMAN | 65.289 % | 180 | 1.25E-52 |