Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'citb080j04' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'Phfumi.CG.MTP2014.S2...' > 
  4. Transcript 'Harore.CG.MTP2014.S6...' > 
  5. Transcript 'KH2012:KH.L55.3.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.L55.3.v1.A.nonSL25-1

Possible name(s)

AC073896.1; CS

Gene model

KH2012:KH.L55.3

Location

KhL55 [6,345 / 8,156]

Sequences

Amino acid sequence

Length: 478

>KH.L55.3.v1.A.nonSL25-1
ISRKLQSNILQIMAFRNSIQKVFPNLQSLNRGLAVGSRRYVSASTDLKEVLAAKIPEKQS
EIKEFKKEFGGAKVGDVSVDMMYGGMRGIKGMVWEPSVLDPEEGIRFRGYTIPDCQDLLP
TAAGGEQPLPEGLFWLLCTGDIPSKDQVQWLSREWANRADLPTHIVNLLDQLPSSVHPMS
QLSAALSVLNTESKFAQAYSDGVHKNEYWQHIYEDAMNLIAKIPIIAAKIYRNLYREGKF
NGTIDENADWSLNFCNMLGYNDPEFIELMRLYLVIHSDHEGGNVSAHTSHLVGSALSDPY
LSMAAAMNGLAGPLHGLANQEVLVWLTGVYKELGGKEVTDEELRKYIWDTLMSGRVVPGY
GHAVLRKTDPRYTCQREFALKHLPDDPMFKLVGQLYKLVPDILLEQGKAKNPWPNVDAHS
GVLLQYYKMTEMQYYTVLFGVSRVLGCLSQQIWSRALGLPLERPKSMSTEGLKKFVKK

Nucleotide sequence

Length: 1,811

>KH2012:KH.L55.3.v1.A.nonSL25-1
ATTTCTCGCAAACTTCAGTCGAATATTCTACAAATCATGGCTTTCCGGAATTCAATTCAA
AAAGTTTTCCCAAACCTGCAATCTTTAAACCGAGGATTGGCTGTCGGTTCGAGGAGGTAT
GTTTCCGCATCTACCGACCTGAAAGAAGTTCTAGCAGCAAAAATCCCTGAAAAACAATCG
GAGATTAAAGAATTTAAAAAAGAATTCGGCGGCGCCAAAGTGGGCGATGTATCGGTGGAC
ATGATGTATGGTGGTATGCGTGGGATCAAGGGGATGGTTTGGGAACCTTCAGTACTTGAC
CCTGAAGAAGGGATTCGATTCCGAGGTTACACAATCCCAGATTGCCAAGATTTGCTTCCA
ACTGCTGCAGGTGGTGAACAACCTTTACCTGAAGGTTTGTTTTGGCTTCTATGTACCGGT
GACATACCAAGTAAAGATCAAGTTCAGTGGTTGAGTCGCGAATGGGCAAATAGAGCTGAT
CTTCCCACGCATATTGTAAACTTGTTGGACCAACTGCCCAGCAGCGTGCACCCTATGTCT
CAACTAAGCGCCGCGCTCAGTGTGTTAAATACCGAATCCAAGTTTGCGCAAGCATATTCC
GACGGTGTTCACAAGAACGAATATTGGCAACATATTTACGAAGATGCGATGAACCTTATC
GCCAAGATACCGATCATCGCTGCAAAGATTTACCGGAACTTATATCGCGAGGGCAAATTC
AACGGAACCATCGACGAAAACGCTGATTGGTCGTTAAACTTCTGCAATATGCTCGGGTAC
AACGATCCAGAGTTTATCGAGTTGATGAGACTTTACCTTGTGATACATTCCGACCACGAG
GGGGGAAACGTTAGCGCTCACACATCTCATCTAGTGGGAAGCGCGCTCAGTGATCCTTAC
CTGTCCATGGCTGCTGCTATGAATGGGCTCGCTGGACCTTTGCATGGGTTGGCCAACCAA
GAAGTTCTTGTTTGGTTGACGGGAGTTTACAAGGAGCTTGGCGGGAAAGAAGTTACCGAT
GAAGAATTGCGAAAATACATCTGGGATACTTTGATGAGTGGACGGGTTGTGCCGGGGTAC
GGACATGCTGTGCTGAGGAAGACTGACCCACGTTATACTTGCCAGCGTGAGTTTGCATTG
AAACATCTTCCTGACGATCCAATGTTTAAACTGGTCGGCCAACTCTACAAGTTGGTTCCT
GATATTCTGCTTGAACAAGGGAAAGCCAAGAACCCATGGCCCAACGTAGATGCGCACAGT
GGGGTGTTGTTGCAGTATTATAAGATGACCGAGATGCAATACTACACCGTGTTGTTCGGG
GTTTCCCGCGTCCTCGGTTGTCTCTCTCAACAAATATGGAGCCGAGCTCTCGGCTTGCCG
CTGGAACGACCAAAGTCCATGAGCACCGAAGGATTGAAAAAATTCGTCAAGAAATAAATT
GTTTAAAAATAAGTTTATAATTTATTAGAAGTTTGTGTTAAATATGTTGCTATATTGATT
AACCAATGTAAAGTTCGATTGTGCGTTAGCGAGAATAAATATTTGTTCAAGTCCATGGTT
TGCTGCCTCTTATGTGCCGCATCGACGTCAATGATCTGAAAATAAAATTCAAAAAATAAA
AGTAAAATTAAACAATGGATTGCAACATACTTTGAACCAGCTATGTTAGGAACGTTTGGT
TTCTTTTTAACATTTTGTTGATTCGTTATCTTCCCCTTCCCTCCCTTATCGACTACTTTT
CCTTTAAAAGCTCGCGTTAAATCAACTTTGACCGTCGGCATTTCTGTTAAAGTCATCGTT
AATTAAATACT

InterProScan

PANTHER
Citrate_synthase (IPR002020) - T[44-477] 1.7E-191
TIGRFAM
Citrate_synthase_euk (IPR010109) - T[45-472] 1.3E-230
SUPERFAMILY
Citrate_synthase_sf (IPR036969) - T[46-475] 6.54E-144
Gene3D
Citrate_synth-like_lrg_a-sub (IPR016142) - T[51-317] 8.1E-201 - T[434-465] 8.1E-201
Pfam
Citrate_synthase (IPR002020) - T[85-465] 3.0E-103
PRINTS
Citrate_synthase (IPR002020) - T[219-232] 2.1E-51 - T[268-283] 2.1E-51 - T[291-319] 2.1E-51 - T[352-372] 2.1E-51 - T[413-429] 2.1E-51 - T[434-448] 2.1E-51
Gene3D
Citrate_synth-like_sm_a-sub (IPR016143) - T[318-433] 8.1E-201
ProSitePatterns
Citrate_synthase_AS (IPR019810) - T[359-371] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CISY_HUMAN 73.423 % 704 0